RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 SLC15A4Q8N697 577 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 EXD3Q8N9H8 876 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 OR2L8Q8NGY9 312 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 C11orf45Q8TAV5 145 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 GLMPQ8WWB7 406 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 JADE3Q92613 823 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 LGMNQ99538 433 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 NUP88Q99567 741 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 SPIN2AQ99865 258 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 SPIN2BQ9BPZ2 258 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 NABP2Q9BQ15 211 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 MS4A7Q9GZW8 240 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 XRN2Q9H0D6 950 aaKnown RBP eCLIP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 WDCPQ9H6R7 721 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 CUTCQ9NTM9 273 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 DNAJB4Q9UDY4 337 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 FEZ2Q9UHY8 353 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 TBX21Q9UL17 535 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 RABGAP1Q9Y3P9 1069 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 MTF2Q9Y483 593 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 COL22A1Q8NFW1 1626 aaPredicted RBP-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 PCM1Q15154 2024 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 NEBP20929 6669 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZFYVE26Q68DK2 2539 aa-1.27□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZFC3H1O60293 1989 aaKnown RBP-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 IGHV4-61A0A0C4DH41 118 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 RRN3P2A6NIE6 340 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 MSH4O15457 936 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 KLF4O43474 513 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 PIAS2O75928 621 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 IGHV4-59P01825 116 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 KRT14P02533 472 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 LYNX1P0DP58 116 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF8P17098 575 aaPredicted RBP-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 DRD1P21728 446 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 MMP8P22894 467 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 HNRNPH1P31943 449 aaKnown RBP-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ETFBP38117 255 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 PBX1P40424 430 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ELK3P41970 407 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 MAGEA11P43364 429 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 CACNG7P62955 275 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 PDE1BQ01064 536 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 CDR2Q01850 454 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 RHAGQ02094 409 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 LGALS3BPQ08380 585 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM27E3Q08E93 113 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 SERTAD2Q14140 314 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF674Q2M3X9 581 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 TMEM35AQ53FP2 167 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM171A1Q5VUB5 890 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 RAET1LQ5VY80 246 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 CYB5R2Q6BCY4 276 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 RAD9BQ6WBX8 426 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 BBS12Q6ZW61 710 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 CHMP1BQ7LBR1 199 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 PIWIL4Q7Z3Z4 852 aaKnown RBP-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 HIPK1Q86Z02 1210 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 SAXO1Q8IYX7 474 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF567Q8N184 647 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 DEFB119Q8N690 84 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ARIH2OSQ8N7S6 290 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 GLIS1Q8NBF1 620 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 CSNK1G2-AS1Q8NCQ2 148 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 SMC1BQ8NDV3 1235 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ABCF1Q8NE71 845 aaKnown RBP eCLIP-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 MYRIPQ8NFW9 859 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 OR5AP2Q8NGF4 316 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ARHGAP45Q92619 1136 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 RND1Q92730 232 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 AZIN2Q96A70 460 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 CLSTN3Q9BQT9 956 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC17A9Q9BYT1 436 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZCWPW1Q9H0M4 648 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 C17orf75Q9HAS0 396 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 KLHL9Q9P2J3 617 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 MBD2Q9UBB5 411 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 RSPH14Q9UHP6 348 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 IGF2RP11717 2491 aa-1.28□□□□□ -2.61
SNORA40.16-201ENST00000517238 ARHGAP23Q9P227 1491 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 WASHC2CQ9Y4E1 1318 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 IGLV1-50A0A075B6I6 118 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 LOC105371242A0A075B767 164 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 C11orf97A0A1B0GVM6 126 aaPredicted RBP-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 TCRBV7S3A2A0A539 114 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 LRRC14BA6NHZ5 514 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 ZFP92A6NM28 416 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 C15orf61A6NNL5 157 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 WNT9BO14905 357 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 MAGEB2O15479 319 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 EMC8O43402 210 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 RRP9O43818 475 aaKnown RBP-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 DTNBO60941 627 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 PRDM1O75626 825 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 KAT7O95251 611 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 IL18RAPO95256 599 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 FAM106CPP0CH98 169 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 ITGAXP20702 1163 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 UGT1A1P22309 533 aa-1.29□□□□□ -2.62
SNORA40.16-201ENST00000517238 HTR7P34969 479 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms