RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 SNX2O60749 519 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KCNJ13O60928 360 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 DNAJC6O75061 913 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 BANF1O75531 89 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 AP2A2O94973 939 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TRIM16O95361 564 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CSF2P04141 144 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 APOA4P06727 396 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 IVLP07476 585 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GSTM1P09488 218 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ERVK-10P10266 1014 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ATP1B2P14415 290 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CHRM3P20309 590 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 OGNP20774 298 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 IDSP22304 550 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ACRV1P26436 265 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PBLDP30039 288 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 HALP42357 657 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CTSKP43235 329 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MAGEA3P43357 314 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 RPIAP49247 311 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 HK3P52790 923 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PMS2P54278 862 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 EIF3BP55884 814 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 NHLH1Q02575 133 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PLOD1Q02809 727 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GSTM4Q03013 218 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ACVR1Q04771 509 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 IFFO1Q0D2I5 559 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GRIK2Q13002 908 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 LRP8Q14114 963 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SMAD1Q15797 465 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 UAP1Q16222 522 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KYNUQ16719 465 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ERCC6LQ2NKX8 1250 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KLHL38Q2WGJ6 581 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 HLA-BQ31612 363 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TTLL9Q3SXZ7 439 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MSS51Q4VC12 460 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 HSP90AA5PQ58FG0 334 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ZNF542PQ5EBM4 170 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PRRT3Q5FWE3 981 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ZNF470Q6ECI4 717 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 UGT3A1Q6NUS8 523 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TTC23LQ6PF05 361 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CRTC3Q6UUV7 619 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ZDHHC24Q6UX98 284 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CCNI2Q6ZMN8 369 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 UNC5AQ6ZN44 842 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 KIAA0408Q6ZU52 694 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TRMT10CQ7L0Y3 403 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TMEM135Q86UB9 458 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TRIM74Q86UV6 250 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TRIM48Q8IWZ4 208 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PHACTR4Q8IZ21 702 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CNPY4Q8N129 248 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SDR16C5Q8N3Y7 309 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 MINDY1Q8N5J2 469 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 BEND7Q8N7W2 519 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SUMF1Q8NBK3 374 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 DDHD1Q8NEL9 900 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 OR13J1Q8NGT2 312 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 LMX1AQ8TE12 382 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SETD7Q8WTS6 366 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SKA2Q8WVK7 121 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 UBLCP1Q8WVY7 318 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SEC14L1Q92503 715 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TSACCQ96A04 125 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 VOPP1Q96AW1 172 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 EID2BQ96D98 161 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 FAM122AQ96E09 287 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CERS2Q96G23 380 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 VPS39Q96JC1 886 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ZNF778Q96MU6 729 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PWWP2AQ96N64 755 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 OR2M4Q96R27 311 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 CYTH2Q99418 400 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ELF4Q99607 663 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 EDEM2Q9BV94 578 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 EBF2Q9HAK2 575 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ARFGAP3Q9NP61 516 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SARS2Q9NP81 518 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TREX1Q9NSU2 369 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TMEM74BQ9NUR3 256 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 INTS10Q9NVR2 710 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SMOXQ9NWM0 555 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 FAM8A1Q9UBU6 413 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 FBXO5Q9UKT4 447 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SUFUQ9UMX1 484 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 GPR34Q9UPC5 381 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 PCDHB1Q9Y5F3 818 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 COMMD10Q9Y6G5 202 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TEX264Q9Y6I9 313 aa5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 DNMT3AQ9Y6K1 912 aaPredicted RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 SPTBN5Q9NRC6 3674 aaKnown RBP5.39□□□□□ -1.55
SCARNA16.4-201ENST00000516956 ANKRD36A6QL64 1941 aa5.38□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TRIOO75962 3097 aa5.38□□□□□ -1.55
SCARNA16.4-201ENST00000516956 EXOC1LA0A1B0GW35 172 aa5.38□□□□□ -1.55
SCARNA16.4-201ENST00000516956 TMEM202A6NGA9 273 aa5.38□□□□□ -1.55
SCARNA16.4-201ENST00000516956 OR2AG2A6NM03 316 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms