RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 SYN3O14994 580 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 DCLK1O15075 740 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 RAD51CO43502 376 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TRAPPC3O43617 180 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TBC1D4O60343 1298 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TADA2AO75478 443 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 RNF8O76064 485 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TRUB2O95900 331 aaKnown RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TIMP1P01033 207 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 AHSGP02765 367 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 FYNP06241 537 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 GALTP07902 379 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 CLTBP09497 229 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 FAM200BP0CF97 657 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 RALAP11233 206 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 PIM1P11309 404 aaPredicted RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 PDGFRAP16234 1089 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 MCM3P25205 808 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 ITGB8P26012 769 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 MIPP30301 263 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 CDKN2BP42772 138 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 PTPN9P43378 593 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 SLC11A1P49279 550 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 GATMP50440 423 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 DRG2P55039 364 aaKnown RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 MRPS25P82663 173 aaKnown RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 LAMB3Q13751 1172 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 ODF1Q14990 250 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TRADDQ15628 312 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 MAPRE1Q15691 268 aaKnown RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 CCNG2Q16589 344 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 LRRC26Q2I0M4 334 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 RAB6CQ53S08 254 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 EFHC1Q5JVL4 640 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 SFRP4Q6FHJ7 346 aaPredicted RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 PM20D1Q6GTS8 502 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TTC27Q6P3X3 843 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 MFSD7Q6UXD7 560 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 KLHL7Q8IXQ5 586 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 THEM5Q8N1Q8 247 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 SCML4Q8N228 414 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 FAM71BQ8TC56 605 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 CLEC4CQ8WTT0 213 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 RAPGEF5Q92565 580 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 SLCO2A1Q92959 643 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TOP1MTQ969P6 601 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TRIM43Q96BQ3 446 aaPredicted RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 RITA1Q96K30 269 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 SLITRK1Q96PX8 696 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 PEBP4Q96S96 227 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 KCNK16Q96T55 309 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 NCAPGQ9BPX3 1015 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 TMEM175Q9BSA9 504 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 COLEC11Q9BWP8 271 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 OSBPL8Q9BZF1 889 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 ZCWPW1Q9H0M4 648 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 RAB6CQ9H0N0 254 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 DDX47Q9H0S4 455 aaKnown RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 WDCPQ9H6R7 721 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 ASNSD1Q9NWL6 643 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 MARCH5Q9NX47 278 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 DDX56Q9NY93 547 aaKnown RBP5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 ADAM28Q9UKQ2 775 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 LTBP2Q14767 1821 aa5.89□□□□□ -1.47
RN7SKP253-201ENST00000516424 COL4A4P53420 1690 aaPredicted RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 COL4A6Q14031 1691 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 GREB1Q4ZG55 1949 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 ZNF638Q14966 1978 aaKnown RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 hCG_1818297A0A087WSY0 165 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 GOLGA6L10A0A0M3HER8 536 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 PI4K2BG5E9Z4 385 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 MAP2K7O14733 419 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 ATP8B1O43520 1251 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 HSF2BPO75031 334 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 GRAP2O75791 330 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 HEXIM1O94992 359 aaKnown RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 KRT7P08729 469 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 NPSP0C0P6 89 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 IBSPP21815 317 aaPredicted RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 KDELR1P24390 212 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 IL4RP24394 825 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 CCKBRP32239 447 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 CHRNA3P32297 505 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 COILP38432 576 aaPredicted RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 MATKP42679 507 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 OR1G1P47890 313 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 CTCFP49711 727 aaPredicted RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 TKTL1P51854 596 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 HDAC4P56524 1084 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 MAP3K7CLP57077 242 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 SLC8A3P57103 927 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 DAOAP59103 153 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 YWHAZP63104 245 aaKnown RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 MRPS5P82675 430 aaKnown RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 YWHAHQ04917 246 aaPredicted RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 RNASELQ05823 741 aaKnown RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 ITKQ08881 620 aa5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 HADHQ16836 314 aaKnown RBP5.88□□□□□ -1.47
RN7SKP253-201ENST00000516424 C15orf59Q2T9L4 293 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms