RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 MT-CO3P00414 261 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 ACP5P13686 325 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 SLC2A4P14672 509 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 PNLIPP16233 465 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A6P19224 532 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 MSH3P20585 1137 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 ITGALP20701 1170 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A1P22309 533 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A4P22310 534 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A3P35503 534 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A5P35504 534 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 CLDN6P56747 220 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 TMEM115Q12893 351 aaPredicted RBP12.33□□□□□ -0.44
PTCD2-210ENST00000515198 HLTFQ14527 1009 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCD2-210ENST00000515198 INSCQ1MX18 579 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 GPRC6AQ5T6X5 926 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 CRTC3Q6UUV7 619 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UNQ6494/PRO21346Q6UXR6 183 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 NAGSQ8N159 534 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 STYXQ8WUJ0 223 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 CNTNAP3BQ96NU0 1288 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 DEPDC7Q96QD5 511 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 AP1M1Q9BXS5 423 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 ASB8Q9H765 288 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 SYNDIG1Q9H7V2 258 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A7Q9HAW7 530 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A10Q9HAW8 530 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 UGT1A8Q9HAW9 530 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 EIF2B3Q9NR50 452 aaKnown RBP12.33□□□□□ -0.44
PTCD2-210ENST00000515198 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
PTCD2-210ENST00000515198 PIH1D1Q9NWS0 290 aaKnown RBP12.33□□□□□ -0.44
PTCD2-210ENST00000515198 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 CRLS1Q9UJA2 301 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 KCNK6Q9Y257 313 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 SLC30A1Q9Y6M5 507 aa12.33□□□□□ -0.44
PTCD2-210ENST00000515198 NCOR2Q9Y618 2525 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 HEATR9A2RTY3 570 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 RHPN2P1A8MT19 583 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 AP3B1O00203 1094 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 GPR39O43194 453 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 PHF2O75151 1096 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 TCEA3O75764 348 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 ECEL1O95672 775 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 VCLP18206 1134 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 AKT1P31749 480 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 CLCNKAP51800 687 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 MAZP56270 477 aaKnown RBP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 XIAPP98170 497 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 NFATC2Q13469 925 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 SPIDRQ14159 915 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 CYP1B1Q16678 543 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 KHDC1Q4VXA5 237 aaKnown RBP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 SNX20Q7Z614 316 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 DCBLD1Q8N8Z6 715 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 GATA6Q92908 595 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 NAPGQ99747 312 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 OSGEPL1Q9H4B0 414 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 CASS4Q9NQ75 786 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 KLC4Q9NSK0 619 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
PTCD2-210ENST00000515198 PCYT1BQ9Y5K3 369 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCD2-210ENST00000515198 CTAGE9A4FU28 777 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 TMEM8BA6NDV4 472 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 MROH6A6NGR9 719 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 C1QTNF9BB2RNN3 333 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 H7C0S8 307 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 SNX2O60749 519 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 KCNJ13O60928 360 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 KRT14P02533 472 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 C1QTNF9P0C862 333 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 RALBP11234 206 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 ADRA1DP25100 572 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 MC4RP32245 332 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-210ENST00000515198 CDK16Q00536 496 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 PLA2G4EQ3MJ16 856 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 GPR33Q49SQ1 333 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 ZRANB3Q5FWF4 1079 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 CDCP2Q5VXM1 449 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 RBM44Q6ZP01 1051 aaKnown RBP12.31□□□□□ -0.44
PTCD2-210ENST00000515198 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 C17orf82Q86X59 251 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-210ENST00000515198 MARCH9Q86YJ5 346 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 SFTPA2Q8IWL1 248 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 RASGEF1AQ8N9B8 481 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 AVL9Q8NBF6 648 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 GRK7Q8WTQ7 553 aa12.31□□□□□ -0.44
PTCD2-210ENST00000515198 HEXDCQ8WVB3 486 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms