RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ITIH5Q86UX2 942 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 PAF1Q8N7H5 531 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TANKQ92844 425 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 THUMPD3Q9BV44 507 aaKnown RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 REXO4Q9GZR2 422 aaKnown RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 NANOGQ9H9S0 305 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 PARVBQ9HBI1 364 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 CD320Q9NPF0 282 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 GIMAP4Q9NUV9 329 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TMEM30AQ9NV96 361 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 SCHIP1Q9P0W5 487 aaPredicted RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 KLQ9UEF7 1012 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 TCAF1Q9Y4C2 921 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 CCDC154A6NI56 674 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 PPP6CO00743 305 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TNPO2O14787 897 aaKnown RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 ANXA9O76027 345 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 RASAL1O95294 804 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 FADS2O95864 444 aaKnown RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 POMCP01189 267 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 MBL2P11226 248 aaPredicted RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 CAPN3P20807 821 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 PRKACGP22612 351 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 ATP6AP1Q15904 470 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 BTBD8Q5XKL5 378 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 HS3ST5Q8IZT8 346 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 PACRGLQ8N7B6 248 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 LRRC58Q96CX6 371 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 ITPKCQ96DU7 683 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 C3orf30Q96M34 536 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 IL12RB2Q99665 862 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 FEM1AQ9BSK4 669 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 RIC8BQ9NVN3 520 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 CMTM6Q9NX76 183 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TMEM181Q9P2C4 612 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 PDE10AQ9Y233 779 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 GPR182O15218 404 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 IDH3BO43837 385 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 NPHS1O60500 1241 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 LTA4HP09960 611 aaKnown RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 SBK3P0C264 359 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 DBTP11182 482 aaKnown RBP9.58□□□□□ -0.88
VCAN-210ENST00000513960 AKR1A1P14550 325 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 AGXTP21549 392 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 MTHFRP42898 656 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TMBIM6P55061 237 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 DIO3P55073 304 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 GPR162Q16538 588 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 GLYATQ6IB77 296 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 FAM117BQ6P1L5 589 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 CXCL17Q6UXB2 119 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 C14orf80Q86SX3 495 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 THEM5Q8N1Q8 247 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 OR10Q1Q8NGQ4 319 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 HASPINQ8TF76 798 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TMBIM1Q969X1 311 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 FAM162AQ96A26 154 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 ESAMQ96AP7 390 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 DMRTB1Q96MA1 342 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TBL1YQ9BQ87 522 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 PAAF1Q9BRP4 392 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TRIM39Q9HCM9 518 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 TMEM9Q9P0T7 183 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 SLC30A1Q9Y6M5 507 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 NUP205Q92621 2012 aa9.58□□□□□ -0.88
VCAN-210ENST00000513960 A8MV72 311 aaPredicted RBP9.57□□□□□ -0.88
VCAN-210ENST00000513960 ZNF701M0R085 212 aaPredicted RBP9.57□□□□□ -0.88
VCAN-210ENST00000513960 NDUFS2O75306 463 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 GSNP06396 782 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 RBP1P09455 135 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ALOX5P09917 674 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 GABRB3P28472 473 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 CYP2C18P33260 490 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 MTPNP58546 118 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 SIM2Q14190 667 aaPredicted RBP9.57□□□□□ -0.88
VCAN-210ENST00000513960 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 INTS11Q5TA45 600 aaKnown RBP9.57□□□□□ -0.88
VCAN-210ENST00000513960 PRMT9Q6P2P2 845 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 TBPL2Q6SJ96 375 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ARHGAP36Q6ZRI8 547 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 TBC1D21Q8IYX1 336 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ADGRG5Q8IZF4 528 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 TWIST2Q8WVJ9 160 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ISL2Q96A47 359 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ITCHQ96J02 903 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ACBD6Q9BR61 282 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 RNF38Q9H0F5 515 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 RIBC2Q9H4K1 309 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 CATSPERBQ9H7T0 1116 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 SARS2Q9NP81 518 aaKnown RBP9.57□□□□□ -0.88
VCAN-210ENST00000513960 AGPAT4Q9NRZ5 378 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.57□□□□□ -0.88
VCAN-210ENST00000513960 CDH7Q9ULB5 785 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 ABCB7O75027 752 aa9.57□□□□□ -0.88
VCAN-210ENST00000513960 FTH1P02794 183 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms