RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CRLS1Q9UJA2 301 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 HAO1Q9UJM8 370 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 DHRS7Q9Y394 339 aa12.73□□□□□ -0.37
PVT1-203ENST00000513868 TRPM6Q9BX84 2022 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 IGLV3-16A0A075B6K0 115 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 DCTN3O75935 186 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 ITGB7P26010 798 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 AQP5P55064 265 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 CORO7P57737 925 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 DCDC1P59894 354 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 ATP6V0D1P61421 351 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 NFKB2Q00653 900 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 ENPP2Q13822 863 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 LRIT3Q3SXY7 679 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 ARL13AQ5H913 290 aaPredicted RBP12.72□□□□□ -0.37
PVT1-203ENST00000513868 LIPIQ6XZB0 460 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 MACC1Q6ZN28 852 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 MTSS1LQ765P7 747 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 NKAPQ8N5F7 415 aaKnown RBP12.72□□□□□ -0.37
PVT1-203ENST00000513868 DTX3LQ8TDB6 740 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 PPP4R1Q8TF05 950 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 EEF1AKMT1Q8WVE0 214 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 UCMAQ8WVF2 138 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 SCAMP4Q969E2 229 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 KIAA1191Q96A73 305 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 CCDC126Q96EE4 140 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 LRRC37BQ96QE4 947 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 TTC1Q99614 292 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 EBF4Q9BQW3 602 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 PRSS16Q9NQE7 514 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 ZDHHC3Q9NYG2 299 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 HEY2Q9UBP5 337 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 TRMT6Q9UJA5 497 aaKnown RBP12.72□□□□□ -0.37
PVT1-203ENST00000513868 SLC12A4Q9UP95 1085 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
PVT1-203ENST00000513868 E5RI56 91 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 CDC7O00311 574 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 PLK4O00444 970 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 NPHS1O60500 1241 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 HSPA4LO95757 839 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 HNRNPLP14866 589 aaKnown RBP eCLIP12.71□□□□□ -0.378e-8■■■□□ 17.6
PVT1-203ENST00000513868 ETV3P41162 512 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 GALK1P51570 392 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 ASPHQ12797 758 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 BNIP1Q12981 228 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 TUBB3Q13509 450 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 HENMT1Q5T8I9 393 aaKnown RBP12.71□□□□□ -0.37
PVT1-203ENST00000513868 PTRHD1Q6GMV3 140 aaKnown RBP12.71□□□□□ -0.37
PVT1-203ENST00000513868 MTDHQ86UE4 582 aaKnown RBP12.71□□□□□ -0.37
PVT1-203ENST00000513868 WDR75Q8IWA0 830 aaKnown RBP12.71□□□□□ -0.37
PVT1-203ENST00000513868 CPNE9Q8IYJ1 553 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 ERP27Q96DN0 273 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.37
PVT1-203ENST00000513868 NECTIN4Q96NY8 510 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 SIKE1Q9BRV8 207 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 FAM83DQ9H4H8 585 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 CYP4F12Q9HCS2 524 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 SMOXQ9NWM0 555 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 CACNA2D2Q9NY47 1150 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 MBD1Q9UIS9 605 aaPredicted RBP12.71□□□□□ -0.37
PVT1-203ENST00000513868 GNPTGQ9UJJ9 305 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 RAP2CQ9Y3L5 183 aa12.71□□□□□ -0.37
PVT1-203ENST00000513868 F8W8V4 182 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 UBXN8O00124 270 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 AREL1O15033 823 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 KERAO60938 352 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 APODP05090 189 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 IMPDH1P20839 514 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 XPAP23025 273 aaPredicted RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 MPSTP25325 297 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 NFKBIAP25963 317 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 SERPINB3P29508 390 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 NSG1P42857 185 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 IL2P60568 153 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 TSNQ15631 228 aaKnown RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 UGT3A1Q6NUS8 523 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 PIWIL4Q7Z3Z4 852 aaKnown RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 SLC22A9Q8IVM8 553 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 CCNYL1Q8N7R7 359 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 GBP7Q8N8V2 638 aaPredicted RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 STAG3L4Q8TBR4 150 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 INPP5DQ92835 1189 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 FUBP1Q96AE4 644 aaKnown RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 ULK4Q96C45 1275 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 PHF21BQ96EK2 531 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 L3HYPDHQ96EM0 354 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 PRR11Q96HE9 360 aaPredicted RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 CNDP1Q96KN2 507 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 ILKAPQ9H0C8 392 aaPredicted RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 CDH19Q9H159 772 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 ABCG8Q9H221 673 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 SARS2Q9NP81 518 aaKnown RBP12.7□□□□□ -0.38
PVT1-203ENST00000513868 LATS2Q9NRM7 1088 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 NCKIPSDQ9NZQ3 722 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 ZDHHC2Q9UIJ5 367 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 STON1Q9Y6Q2 735 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
PVT1-203ENST00000513868 RGSL1A5PLK6 1076 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms