RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TRIM24O15164 1050 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 OR1I1O60431 355 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 NIPSNAP2O75323 286 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 PRNPP04156 253 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CBSLP0DN79 551 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ARSAP15289 507 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 MPSTP25325 297 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CBSP35520 551 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 NSG1P42857 185 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 IRX1P78414 480 aaPredicted RBP8.29□□□□□ -1.08
RNF4-220ENST00000513578 HYAL1Q12794 435 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CDC16Q13042 620 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ADAM15Q13444 863 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 OR4D1Q15615 310 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CHRNA6Q15825 494 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 PREPLQ4J6C6 727 aaPredicted RBP8.29□□□□□ -1.08
RNF4-220ENST00000513578 UNC50Q53HI1 259 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ARSIQ5FYB1 569 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 TCEAL5Q5H9L2 206 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 GPRC6AQ5T6X5 926 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 SEL1L3Q68CR1 1132 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 METTL2BQ6P1Q9 378 aaKnown RBP8.29□□□□□ -1.08
RNF4-220ENST00000513578 FAM151BQ6UXP7 276 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 TSPAN33Q86UF1 283 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
RNF4-220ENST00000513578 NLRP8Q86W28 1048 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 C12orf40Q86WS4 652 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 C10orf67Q8IYJ2 551 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 NRSN1Q8IZ57 195 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CHCHD4Q8N4Q1 142 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CPA6Q8N4T0 437 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CPSF7Q8N684 471 aaKnown RBP8.29□□□□□ -1.08
RNF4-220ENST00000513578 PAF1Q8N7H5 531 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 GPR26Q8NDV2 337 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 GIMAP7Q8NHV1 300 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 FUBP1Q96AE4 644 aaKnown RBP8.29□□□□□ -1.08
RNF4-220ENST00000513578 PBXIP1Q96AQ6 731 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ELSPBP1Q96BH3 223 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 TIFAQ96CG3 184 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 RILPQ96NA2 401 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 BTBD10Q9BSF8 475 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 C1orf21Q9H246 121 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CERS4Q9HA82 394 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ZFP14Q9HCL3 533 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 SLC40A1Q9NP59 571 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 HPS4Q9NQG7 708 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ARL8BQ9NVJ2 186 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 B4GALT6Q9UBX8 382 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 TAGLN3Q9UI15 199 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ZDHHC2Q9UIJ5 367 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CRLS1Q9UJA2 301 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 TRIM33Q9UPN9 1127 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 FAM50BQ9Y247 325 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 ANKRD12Q6UB98 2062 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 GOLGA8QA0A0J9YX86 632 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 GOLGA8OA6NCC3 632 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 NEMP2A6NFY4 417 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 PRRT4C9JH25 899 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 E5RI56 91 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 GOLGA8NF8WBI6 632 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 H0Y858 1186 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 NPC1O15118 1278 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 MGRN1O60291 552 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 MAGEC1O60732 1142 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ECI2O75521 394 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 LEFTY1O75610 366 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 AP2A2O94973 939 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 CBX6O95503 412 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 CTSLP07711 333 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 RPS17P08708 135 aaKnown RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 ESRRAP11474 423 aaPredicted RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 CHRM3P20309 590 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 DGKAP23743 735 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ITGB7P26010 798 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TARSP26639 723 aaKnown RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 SLC6A11P48066 632 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 RGS4P49798 205 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 MNAT1P51948 309 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ALDH18A1P54886 795 aaKnown RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 ELF3P78545 371 aaPredicted RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 CREB5Q02930 508 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 RALGDSQ12967 914 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 RUNX3Q13761 415 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ARHGEF7Q14155 803 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 GBX1Q14549 363 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 HNRNPA1L2Q32P51 320 aaKnown RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 CDKL4Q5MAI5 379 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ATAT1Q5SQI0 421 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TRIM68Q6AZZ1 485 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 PTRHD1Q6GMV3 140 aaKnown RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 TANGO2Q6ICL3 276 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TTC23LQ6PF05 361 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 VITQ6UXI7 678 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ACAD11Q709F0 780 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 GET4Q7L5D6 327 aaPredicted RBP8.28□□□□□ -1.08
RNF4-220ENST00000513578 CYP2U1Q7Z449 544 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TECPR1Q7Z6L1 1165 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 ADAMTSL2Q86TH1 951 aa8.28□□□□□ -1.08
RNF4-220ENST00000513578 TTC7BQ86TV6 843 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms