RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 PLXDC2Q6UX71 529 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 STXBP4Q6ZWJ1 553 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 GSTA5Q7RTV2 222 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 GTSCR1Q86UQ5 136 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 ANKRD42Q8N9B4 389 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 RBM15BQ8NDT2 890 aaKnown RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 OR14L1PQ8NHC6 308 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 PSPC1Q8WXF1 523 aaKnown RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 GTF3C6Q969F1 213 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 RNF125Q96EQ8 232 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 RRNAD1Q96FB5 475 aaKnown RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 LINC00479Q96M42 142 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 EGFL8Q99944 293 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 RANBP17Q9H2T7 1088 aaKnown RBP3.41□□□□□ -1.86
LINC01088-210ENST00000513153 PPCSQ9HAB8 311 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 SLC28A3Q9HAS3 691 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 C2orf42Q9NWW7 574 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 OR14J1Q9UGF5 321 aa3.41□□□□□ -1.86
LINC01088-210ENST00000513153 CCDC196A0A1B0GTZ2 297 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 H0YIN7 160 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 BUD23O43709 281 aaKnown RBP3.4□□□□□ -1.87
LINC01088-210ENST00000513153 ZNF821O75541 412 aaPredicted RBP3.4□□□□□ -1.87
LINC01088-210ENST00000513153 POLBP06746 335 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 NR2F2P24468 414 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 ELF1P32519 619 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 EIF3BP55884 814 aaKnown RBP3.4□□□□□ -1.87
LINC01088-210ENST00000513153 LCN10Q6JVE6 187 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 SPAG16Q8N0X2 631 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 LYG1Q8N1E2 194 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 UTP15Q8TED0 518 aaKnown RBP3.4□□□□□ -1.87
LINC01088-210ENST00000513153 ART5Q96L15 291 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 DCTN5Q9BTE1 182 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 SIL1Q9H173 461 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 ERVMER34-1Q9H9K5 563 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 ZDHHC18Q9NUE0 388 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 INTS10Q9NVR2 710 aaKnown RBP3.4□□□□□ -1.87
LINC01088-210ENST00000513153 CYP46A1Q9Y6A2 500 aa3.4□□□□□ -1.87
LINC01088-210ENST00000513153 DISP3Q9P2K9 1392 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 A0A0G2JNG1 304 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 SH2B2O14492 632 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-210ENST00000513153 CLIC2O15247 247 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 HOXC11O43248 304 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-210ENST00000513153 TNFSF14O43557 240 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 JRKO75564 520 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 TSHBP01222 138 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 NR3C1P04150 777 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 TFAP2AP05549 437 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 IL7RP16871 459 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 MCCP23508 829 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 HOXA13P31271 388 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-210ENST00000513153 CLK1P49759 484 aaKnown RBP3.39□□□□□ -1.87
LINC01088-210ENST00000513153 LMO4P61968 165 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 MBTD1Q05BQ5 628 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 TMEM187Q14656 261 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 KIR2DS5Q14953 304 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 KIAA1644Q3SXP7 199 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 CXorf66Q5JRM2 361 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-210ENST00000513153 ZNF790Q6PG37 636 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 Q75L30 129 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 NFKBIDQ8NI38 313 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 ZNF653Q96CK0 615 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 SENP5Q96HI0 755 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-210ENST00000513153 ATOH8Q96SQ7 321 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 OPRPNQ99935 248 aaPredicted RBP3.39□□□□□ -1.87
LINC01088-210ENST00000513153 UBXN6Q9BZV1 441 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 RAD21L1Q9H4I0 556 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 TRPC7Q9HCX4 862 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 ABI3Q9P2A4 366 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 KLHL9Q9P2J3 617 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 GJD2Q9UKL4 321 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 DGKBQ9Y6T7 804 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 CAPN7Q9Y6W3 813 aa3.39□□□□□ -1.87
LINC01088-210ENST00000513153 A0A087X002 238 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 A6NL46 340 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 EIF3CLB5ME19 914 aaKnown RBP3.38□□□□□ -1.87
LINC01088-210ENST00000513153 IFRD1O00458 451 aaPredicted RBP3.38□□□□□ -1.87
LINC01088-210ENST00000513153 ARHGEF9O43307 516 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 F9P00740 461 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 ZNF10P21506 573 aaPredicted RBP3.38□□□□□ -1.87
LINC01088-210ENST00000513153 MAP2K2P36507 400 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 SPOCK1Q08629 439 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 ZFP69Q49AA0 526 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 ASPRV1Q53RT3 343 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 SLC9C2Q5TAH2 1124 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 TSSK4Q6SA08 328 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 PACS1Q6VY07 963 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
LINC01088-210ENST00000513153 ATG9AQ7Z3C6 839 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 LONP2Q86WA8 852 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 DDHD1Q8NEL9 900 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 ZNF473Q8WTR7 871 aaKnown RBP3.38□□□□□ -1.87
LINC01088-210ENST00000513153 PDZD7Q9H5P4 517 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 FGF22Q9HCT0 170 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 PCDHB16Q9NRJ7 776 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 GGA3Q9NZ52 723 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 UBA2Q9UBT2 640 aaPredicted RBP3.38□□□□□ -1.87
LINC01088-210ENST00000513153 STK39Q9UEW8 545 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 CAMK2AQ9UQM7 478 aa3.38□□□□□ -1.87
LINC01088-210ENST00000513153 C1orf226A1L170 272 aa3.37□□□□□ -1.87
LINC01088-210ENST00000513153 TMEM178BH3BS89 294 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms