RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CNOT8Q9UFF9 292 aaKnown RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 KCNK6Q9Y257 313 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 A0A1B0GTH6 734 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 LGALS16A8MUM7 142 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 J3KR12 359 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 TRAFD1O14545 582 aaPredicted RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 TOX3O15405 576 aaPredicted RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 SNX2O60749 519 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SERPINC1P01008 464 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CAPN1P07384 714 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 NELFEP18615 380 aaKnown RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 LHCGRP22888 699 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 TEAD1P28347 426 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 KIR3DL1P43629 444 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 KCNK10P57789 538 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 TUBB3Q13509 450 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CACNA1CQ13936 2221 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 GRM3Q14832 879 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CDSNQ15517 529 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 VWA2Q5GFL6 755 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CACHD1Q5VU97 1274 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 IZUMO3Q5VZ72 239 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 GJB7Q6PEY0 223 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 FAM92BQ6ZTR7 304 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 Q6ZVL8 140 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 MED25Q71SY5 747 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 MRGPRGQ86SM5 289 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 FAR1Q8WVX9 515 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 RSC1A1Q92681 617 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CCDC120Q96HB5 630 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 CRACR2AQ9BSW2 395 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 XPO4Q9C0E2 1151 aaKnown RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 EPB41L1Q9H4G0 881 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 PDFQ9HBH1 243 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SIX2Q9NPC8 291 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 FGF21Q9NSA1 209 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SCHIP1Q9P0W5 487 aaPredicted RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 RARRES3Q9UL19 164 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 TCFL5Q9UL49 500 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 SNX7Q9UNH6 387 aa8.99□□□□□ -0.97
NUP54-211ENST00000512151 NOVA2Q9UNW9 492 aaKnown RBP8.99□□□□□ -0.97
NUP54-211ENST00000512151 SEC16AO15027 2179 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 IGHV5-51A0A0C4DH38 117 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 DNAJC6O75061 913 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 UBXN7O94888 489 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 HEXIM1O94992 359 aaKnown RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 PON1P27169 355 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 ADRA1BP35368 520 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 PBX1P40424 430 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 UBASH3AP57075 661 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 TPM4P67936 248 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 TLE4Q04727 773 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 SRSF11Q05519 484 aaKnown RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 LRP8Q14114 963 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 C2CD6Q53TS8 623 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 DCAF10Q5QP82 559 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 PRAMEF17Q5VTA0 474 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 SPOCD1Q6ZMY3 1216 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 TMEM26Q6ZUK4 368 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 GALNT13Q8IUC8 556 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 ZNF808Q8N4W9 903 aaPredicted RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 TSEN2Q8NCE0 465 aaKnown RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 TBC1D31Q96DN5 1066 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 C14orf79Q96F83 325 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 SLC41A2Q96JW4 573 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 PLEKHG4BQ96PX9 1271 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 TRAPPC9Q96Q05 1148 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 AGAP2Q99490 1192 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 SLX1AQ9BQ83 275 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 MLPHQ9BV36 600 aaPredicted RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 STN1Q9H668 368 aaKnown RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 ATP13A3Q9H7F0 1226 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 PDE7BQ9NP56 450 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 UBE2TQ9NPD8 197 aaPredicted RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 UBA2Q9UBT2 640 aaPredicted RBP8.98□□□□□ -0.97
NUP54-211ENST00000512151 CD84Q9UIB8 345 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 SIK3Q9Y2K2 1263 aa8.98□□□□□ -0.97
NUP54-211ENST00000512151 ABCA4P78363 2273 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
NUP54-211ENST00000512151 TMEM200CA6NKL6 621 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 KIAA1324LA8MWY0 1029 aaPredicted RBP8.97□□□□□ -0.97
NUP54-211ENST00000512151 PES1O00541 588 aaKnown RBP8.97□□□□□ -0.97
NUP54-211ENST00000512151 EPHB6O15197 1021 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 P4HA2O15460 535 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 RAB40ALP0C0E4 278 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 EBLN1P0CF75 366 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 ACP5P13686 325 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 F3P13726 295 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 AMD1P17707 334 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 SERPINA4P29622 427 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 RRADP55042 308 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 ATP11AP98196 1134 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 UBXN1Q04323 297 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 MYBPC3Q14896 1274 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 SYCP1Q15431 976 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 HIF1AQ16665 826 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 PLEKHS1Q5SXH7 462 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 FAM102AQ5T9C2 384 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms