RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SEMA6CQ9H3T2 930 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 OSGEPL1Q9H4B0 414 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 TRIM39Q9HCM9 518 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 PRDM8Q9NQV8 689 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 RAD18Q9NS91 495 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 KLC4Q9NSK0 619 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 HACD3Q9P035 362 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 DNAJC16Q9Y2G8 782 aa13.13□□□□□ -0.31
RNF4-215ENST00000511843 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 CCL22O00626 93 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 KRT86O43790 486 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 TNFSF15O95150 251 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 METTL18O95568 372 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 MPSTP25325 297 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 CSF2RBP32927 897 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 SPAM1P38567 509 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 CCZ1BP86790 482 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 CCZ1P86791 482 aaPredicted RBP13.12□□□□□ -0.31
RNF4-215ENST00000511843 PRPSAP1Q14558 356 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 SEPT7Q16181 437 aaKnown RBP13.12□□□□□ -0.31
RNF4-215ENST00000511843 INSCQ1MX18 579 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 PHF19Q5T6S3 580 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 RANBP10Q6VN20 620 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 RAB11FIP2Q7L804 512 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 ZNF547Q8IVP9 402 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 LRRC8AQ8IWT6 810 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 SFRP1Q8N474 314 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
RNF4-215ENST00000511843 TTC13Q8NBP0 860 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 WDR36Q8NI36 951 aaKnown RBP13.12□□□□□ -0.31
RNF4-215ENST00000511843 SLC35B2Q8TB61 432 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 SLC46A1Q96NT5 459 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 SRPK1Q96SB4 655 aaKnown RBP13.12□□□□□ -0.31
RNF4-215ENST00000511843 TBL1YQ9BQ87 522 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 TSGA10Q9BZW7 698 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 TRABDQ9H4I3 376 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 RMI1Q9H9A7 625 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 PIH1D1Q9NWS0 290 aaKnown RBP13.12□□□□□ -0.31
RNF4-215ENST00000511843 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 LOC400499M0QZD8 3231 aa13.12□□□□□ -0.31
RNF4-215ENST00000511843 PIKFYVEQ9Y2I7 2098 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 GLYATL1P3A0A0U1RQE8 302 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 A6NCN8 305 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 C5orf60A6NFR6 353 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 CHUKO15111 745 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 DXOO77932 396 aaKnown RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 CDK14O94921 469 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 ITIH1P19827 911 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 CD1CP29017 333 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 RBMS1P29558 406 aaKnown RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 ABCG1P45844 678 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 TMPRSS15P98073 1019 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 CFHR1Q03591 330 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 ZFP36L1Q07352 338 aaKnown RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 NFATC2Q13469 925 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 NR1D2Q14995 579 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 SEL1L2Q5TEA6 688 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 PDPK2PQ6A1A2 396 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 DENND5AQ6IQ26 1287 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 ZNF574Q6ZN55 896 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 ARHGEF18Q6ZSZ5 1173 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 PRUNE1Q86TP1 453 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 SLITRK4Q8IW52 837 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 FBXO39Q8N4B4 442 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 RCBTB1Q8NDN9 531 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 OR4K2Q8NGD2 314 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 OR13C4Q8NGS5 318 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 CCDC97Q96F63 343 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 LIN37Q96GY3 246 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 ZNF578Q96N58 590 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 TMEM74Q96NL1 305 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 VPS35Q96QK1 796 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 KCNK4Q9NYG8 393 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 SCHIP1Q9P0W5 487 aaPredicted RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 PISDQ9UG56 409 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 FKBPLQ9UIM3 349 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
RNF4-215ENST00000511843 PKP3Q9Y446 797 aa13.11□□□□□ -0.31
RNF4-215ENST00000511843 IGHV1OR21-1A0A087WYE8 117 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 PRAMEF33A0A0G2JMD5 474 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 PLD2O14939 933 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 STX7O15400 261 aaKnown RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 RRP8O43159 456 aaKnown RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 CPNE6O95741 557 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 CCDC175P0C221 793 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 F3P13726 295 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 ZNF7P17097 686 aaPredicted RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 TPH1P17752 444 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 LPOP22079 712 aaPredicted RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 CCKBRP32239 447 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 ETV5P41161 510 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 MAPK9P45984 424 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 PCBP4P57723 403 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms