RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 PNLIPP16233 465 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A6P19224 532 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 MSH3P20585 1137 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 ITGALP20701 1170 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A1P22309 533 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A4P22310 534 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A3P35503 534 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A5P35504 534 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 CLDN6P56747 220 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 TMEM115Q12893 351 aaPredicted RBP12.33□□□□□ -0.44
PTCD2-209ENST00000511752 HLTFQ14527 1009 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCD2-209ENST00000511752 INSCQ1MX18 579 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 GPRC6AQ5T6X5 926 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 CRTC3Q6UUV7 619 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UNQ6494/PRO21346Q6UXR6 183 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 NAGSQ8N159 534 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 STYXQ8WUJ0 223 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 CNTNAP3BQ96NU0 1288 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 DEPDC7Q96QD5 511 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 AP1M1Q9BXS5 423 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 ASB8Q9H765 288 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 SYNDIG1Q9H7V2 258 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A7Q9HAW7 530 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A10Q9HAW8 530 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 UGT1A8Q9HAW9 530 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 EIF2B3Q9NR50 452 aaKnown RBP12.33□□□□□ -0.44
PTCD2-209ENST00000511752 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
PTCD2-209ENST00000511752 PIH1D1Q9NWS0 290 aaKnown RBP12.33□□□□□ -0.44
PTCD2-209ENST00000511752 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 CRLS1Q9UJA2 301 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 KCNK6Q9Y257 313 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 SLC30A1Q9Y6M5 507 aa12.33□□□□□ -0.44
PTCD2-209ENST00000511752 NCOR2Q9Y618 2525 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 HEATR9A2RTY3 570 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 RHPN2P1A8MT19 583 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 AP3B1O00203 1094 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 GPR39O43194 453 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 PHF2O75151 1096 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 TCEA3O75764 348 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 ECEL1O95672 775 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 VCLP18206 1134 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 AKT1P31749 480 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 CLCNKAP51800 687 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 MAZP56270 477 aaKnown RBP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 XIAPP98170 497 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 NFATC2Q13469 925 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 SPIDRQ14159 915 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 CYP1B1Q16678 543 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 KHDC1Q4VXA5 237 aaKnown RBP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 SNX20Q7Z614 316 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 DCBLD1Q8N8Z6 715 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 GATA6Q92908 595 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 NAPGQ99747 312 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 OSGEPL1Q9H4B0 414 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 CASS4Q9NQ75 786 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 KLC4Q9NSK0 619 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
PTCD2-209ENST00000511752 PCYT1BQ9Y5K3 369 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCD2-209ENST00000511752 CTAGE9A4FU28 777 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 TMEM8BA6NDV4 472 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 MROH6A6NGR9 719 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 C1QTNF9BB2RNN3 333 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 H7C0S8 307 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 SNX2O60749 519 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 KCNJ13O60928 360 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 KRT14P02533 472 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 C1QTNF9P0C862 333 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 RALBP11234 206 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 ADRA1DP25100 572 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 MC4RP32245 332 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-209ENST00000511752 CDK16Q00536 496 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 PLA2G4EQ3MJ16 856 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 GPR33Q49SQ1 333 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 ZRANB3Q5FWF4 1079 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 CDCP2Q5VXM1 449 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 RBM44Q6ZP01 1051 aaKnown RBP12.31□□□□□ -0.44
PTCD2-209ENST00000511752 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 C17orf82Q86X59 251 aaPredicted RBP12.31□□□□□ -0.44
PTCD2-209ENST00000511752 MARCH9Q86YJ5 346 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 SFTPA2Q8IWL1 248 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 RASGEF1AQ8N9B8 481 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 AVL9Q8NBF6 648 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 GRK7Q8WTQ7 553 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 HEXDCQ8WVB3 486 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 DCUN1D1Q96GG9 259 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 CDKN2AIPNLQ96HQ2 116 aa12.31□□□□□ -0.44
PTCD2-209ENST00000511752 ZNF514Q96K75 400 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms