RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 APRTP07741 180 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 MSNP26038 577 aaKnown RBP13.8□□□□□ -0.2
DDX41-212ENST00000511040 VPS41P49754 854 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 CCL7P80098 99 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 TMEM115Q12893 351 aaPredicted RBP13.8□□□□□ -0.2
DDX41-212ENST00000511040 CAMK2BQ13554 666 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 SEMA5AQ13591 1074 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 LRP8Q14114 963 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 CCDC38Q502W7 563 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 CERCAMQ5T4B2 595 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 GPRC6AQ5T6X5 926 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 CDCP2Q5VXM1 449 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 TTC27Q6P3X3 843 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 NAGSQ8N159 534 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 ARL14Q8N4G2 192 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 DCBLD1Q8N8Z6 715 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 RASGEF1AQ8N9B8 481 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 DNAAF3Q8N9W5 541 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 MAGOHBQ96A72 148 aaKnown RBP13.8□□□□□ -0.2
DDX41-212ENST00000511040 OSGEPL1Q9H4B0 414 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 KLC4Q9NSK0 619 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 LRIT1Q9P2V4 623 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 TBC1D29Q9UFV1 150 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 SLC23A2Q9UGH3 650 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 DNAJC16Q9Y2G8 782 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 PCDHB1Q9Y5F3 818 aa13.8□□□□□ -0.2
DDX41-212ENST00000511040 FRYQ5TBA9 3013 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 RHPN2P1A8MT19 583 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 PGRMC1O00264 195 aaKnown RBP13.79□□□□□ -0.2
DDX41-212ENST00000511040 CHUKO15111 745 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 VEGFDO43915 354 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 SUN1O94901 812 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 PROS1P07225 676 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 GLB1P16278 677 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 AKT1P31749 480 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 CTSCP53634 463 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 GNG11P61952 73 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 BASP1P80723 227 aaKnown RBP13.79□□□□□ -0.2
DDX41-212ENST00000511040 XIAPP98170 497 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 PDE1BQ01064 536 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 CCDC173Q0VFZ6 552 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 BIRC2Q13490 618 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 PEX6Q13608 980 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 ITGA9Q13797 1035 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 GTF2H3Q13889 308 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 INSCQ1MX18 579 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 RBM44Q6ZP01 1051 aaKnown RBP13.79□□□□□ -0.2
DDX41-212ENST00000511040 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 LINC00523Q86TU6 105 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 LRRTM4Q86VH4 590 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 TRAPPC5Q8IUR0 188 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 CCNJLQ8IV13 435 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 ZNF547Q8IVP9 402 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 MDM1Q8TC05 714 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 CCDC97Q96F63 343 aaPredicted RBP13.79□□□□□ -0.2
DDX41-212ENST00000511040 TTC25Q96NG3 672 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 DEPDC7Q96QD5 511 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 ASB8Q9H765 288 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 PRDM8Q9NQV8 689 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 HOMER3Q9NSC5 361 aa13.79□□□□□ -0.2
DDX41-212ENST00000511040 TTC7AQ9ULT0 858 aaPredicted RBP13.79□□□□□ -0.2
DDX41-212ENST00000511040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX41-212ENST00000511040 ZFC3H1O60293 1989 aaKnown RBP13.79□□□□□ -0.2
DDX41-212ENST00000511040 ZNF106Q9H2Y7 1883 aaKnown RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 A0A1W2PQM1 296 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 ERI2A8K979 691 aaKnown RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 GPR89AB7ZAQ6 455 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 KMOO15229 486 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 GPR89BP0CG08 455 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 PRSS56P0CW18 603 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 ZNF7P17097 686 aaPredicted RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 MSH3P20585 1137 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 ALDH4A1P30038 563 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 PBLDP30039 288 aaPredicted RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 MC4RP32245 332 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 CDKN1CP49918 316 aaPredicted RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 OR1D5P58170 312 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 CDH17Q12864 832 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 NFATC2Q13469 925 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 SPIDRQ14159 915 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 SEPT7Q16181 437 aaKnown RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 ST3GAL2Q16842 350 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 AMZ1Q400G9 498 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 LDLRAP1Q5SW96 308 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 C17orf82Q86X59 251 aaPredicted RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 ZNF761Q86XN6 746 aaPredicted RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 C17orf53Q8N3J3 647 aaPredicted RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 DDHD1Q8NEL9 900 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 OR6C4Q8NGE1 309 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 DTX3LQ8TDB6 740 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 SLC37A2Q8TED4 501 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 ZCCHC14Q8WYQ9 949 aaKnown RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 LRRN3Q9H3W5 708 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 CASS4Q9NQ75 786 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
DDX41-212ENST00000511040 SMOXQ9NWM0 555 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 CRLS1Q9UJA2 301 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 APPL1Q9UKG1 709 aa13.78□□□□□ -0.2
DDX41-212ENST00000511040 ATXN7L1Q9ULK2 861 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms