RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 RGRP47804 291 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 PPP1CAP62136 330 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 TUBB4BP68371 445 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 DPTQ07507 201 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 TUBB2AQ13885 445 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 TLR1Q15399 786 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 LONRF1Q17RB8 773 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 FAAH2Q6GMR7 532 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 CERS6Q6ZMG9 384 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 HSD11B1LQ7Z5J1 315 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 PASD1Q8IV76 773 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 ARHGEF19Q8IW93 802 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 NUDT8Q8WV74 236 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 PAGE5Q96GU1 130 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 KREMEN1Q96MU8 473 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 GBP5Q96PP8 586 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 TUBB2BQ9BVA1 445 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 RAB33BQ9H082 229 aa10.59□□□□□ -0.71
SNF8-207ENST00000509995 UBA2Q9UBT2 640 aaPredicted RBP10.59□□□□□ -0.71
SNF8-207ENST00000509995 TRIM49BA6NDI0 452 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 PEX12O00623 359 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 TRAFD1O14545 582 aaPredicted RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 SLC16A3O15427 465 aaKnown RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 DNAJC6O75061 913 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 UNC5CO95185 931 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 ACP5P13686 325 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 XRCC1P18887 633 aaPredicted RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 FMO5P49326 533 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 MARSP56192 900 aaKnown RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 FOLH1Q04609 750 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 BCL2L1Q07817 233 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 PAK1Q13153 545 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 PRKD1Q15139 912 aaPredicted RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 PTPN20Q4JDL3 420 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 RPUSD3Q6P087 351 aaKnown RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 Q6ZVL8 140 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 BNIPLQ7Z465 357 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 SRLQ86TD4 932 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 TMEM200AQ86VY9 491 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 TRIM48Q8IWZ4 208 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 SYTL1Q8IYJ3 562 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 C1orf131Q8NDD1 294 aaKnown RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 OR8K5Q8NH50 307 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 LMO3Q8TAP4 145 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 CPT1BQ92523 772 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 PCMTD1Q96MG8 357 aaPredicted RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 TRIM56Q9BRZ2 755 aaKnown RBP10.58□□□□□ -0.72
SNF8-207ENST00000509995 KCND1Q9NSA2 647 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 BTRCQ9Y297 605 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 PADI2Q9Y2J8 665 aa10.58□□□□□ -0.72
SNF8-207ENST00000509995 CCDC78A2IDD5 438 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 FAM72CH0Y354 149 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 PSMD11O00231 422 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 LRIG2O94898 1065 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 VIPP01282 170 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 LHCGRP22888 699 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 VIPR1P32241 457 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 HADHAP40939 763 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 CSNK1DP48730 415 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 MEOX1P50221 254 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 ADAM8P78325 824 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 CEBPEQ15744 281 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 GPR19Q15760 415 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 FAM72AQ5TYM5 149 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 PRAMEF17Q5VTA0 474 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 FAM72DQ6L9T8 149 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 FAM72BQ86X60 149 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 KMT5CQ86Y97 462 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 ZDHHC17Q8IUH5 632 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 PHYKPLQ8IUZ5 450 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 D2HGDHQ8N465 521 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 DNAJB8Q8NHS0 232 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 SHC3Q92529 594 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 SPOCK2Q92563 424 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 ZNF501Q96CX3 271 aaPredicted RBP10.57□□□□□ -0.72
SNF8-207ENST00000509995 TBC1D31Q96DN5 1066 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 COX14Q96I36 57 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 MAGEB10Q96LZ2 347 aaPredicted RBP10.57□□□□□ -0.72
SNF8-207ENST00000509995 TAAR6Q96RI8 345 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 GTPBP4Q9BZE4 634 aaKnown RBP10.57□□□□□ -0.72
SNF8-207ENST00000509995 SYNCQ9H7C4 482 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 PDFQ9HBH1 243 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 PCMTD2Q9NV79 361 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 P4HTMQ9NXG6 502 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 SCHIP1Q9P0W5 487 aaPredicted RBP10.57□□□□□ -0.72
SNF8-207ENST00000509995 VPS18Q9P253 973 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 TLN2Q9Y4G6 2542 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 ANK2Q01484 3957 aa10.57□□□□□ -0.72
SNF8-207ENST00000509995 C9J4A7 227 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 PMM2O15305 246 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 LDB2O43679 373 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 KLF7O75840 302 aaPredicted RBP10.56□□□□□ -0.72
SNF8-207ENST00000509995 ASMTLO95671 621 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 MYL1P05976 194 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 HEXAP06865 529 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 ESRRAP11474 423 aaPredicted RBP10.56□□□□□ -0.72
SNF8-207ENST00000509995 TNFAIP3P21580 790 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 FLT3P36888 993 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms