RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 ZNF567Q8N184 647 aa13.17□□□□□ -0.3
SDHA-210ENST00000509420 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.17□□□□□ -0.3
SDHA-210ENST00000509420 GLYATL1Q969I3 302 aa13.17□□□□□ -0.3
SDHA-210ENST00000509420 QKIQ96PU8 341 aaKnown RBP eCLIP13.17□□□□□ -0.31e-40■■■■■ 104.8
SDHA-210ENST00000509420 KCNK4Q9NYG8 393 aa13.17□□□□□ -0.3
SDHA-210ENST00000509420 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
SDHA-210ENST00000509420 PCDHGA4Q9Y5G9 962 aa13.17□□□□□ -0.3
SDHA-210ENST00000509420 B3GALT1Q9Y5Z6 326 aa13.17□□□□□ -0.3
SDHA-210ENST00000509420 COL12A1Q99715 3063 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 F5H423 210 aaPredicted RBP13.16□□□□□ -0.3
SDHA-210ENST00000509420 SPOPO43791 374 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 ASMTLO95671 621 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 F3P13726 295 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 NR2C2P49116 596 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 WNT3AP56704 352 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 GPLD1P80108 840 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 HHEXQ03014 270 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 C19orf57Q0VDD7 668 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 TRA2AQ13595 282 aaKnown RBP eCLIP13.16□□□□□ -0.3
SDHA-210ENST00000509420 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 TFDP3Q5H9I0 405 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 SIRPB2Q5JXA9 342 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 PDPK2PQ6A1A2 396 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 TMEM71Q6P5X7 295 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 WDR74Q6RFH5 385 aaPredicted RBP13.16□□□□□ -0.3
SDHA-210ENST00000509420 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 NKD1Q969G9 470 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 HAUS1Q96CS2 278 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 PLEKHG4BQ96PX9 1271 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 ZSCAN5AQ9BUG6 496 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 SPATA16Q9BXB7 569 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 SIDT1Q9NXL6 827 aaKnown RBP13.16□□□□□ -0.3
SDHA-210ENST00000509420 IL17CQ9P0M4 197 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 PCDHA13Q9Y5I0 950 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 SLC30A1Q9Y6M5 507 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
SDHA-210ENST00000509420 MN1Q10571 1320 aaPredicted RBP13.15□□□□□ -0.3
SDHA-210ENST00000509420 SLC4A1P02730 911 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 ITGB6P18564 788 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 HMGCLP35914 325 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 SLC19A1P41440 591 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 MAGEA1P43355 309 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 CYP4F2P78329 520 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 NFATC2Q13469 925 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 OLIG2Q13516 323 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 PLA2G4EQ3MJ16 856 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 KAZNQ674X7 775 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 CRTC3Q6UUV7 619 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 BBS12Q6ZW61 710 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 ZC3H18Q86VM9 953 aaKnown RBP13.15□□□□□ -0.3
SDHA-210ENST00000509420 CCHCR1Q8TD31 782 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 TFB1MQ8WVM0 346 aaKnown RBP13.15□□□□□ -0.3
SDHA-210ENST00000509420 ART4Q93070 314 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 VPS35Q96QK1 796 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 FCRL5Q96RD9 977 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 TAAR9Q96RI9 348 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 MAK16Q9BXY0 300 aaKnown RBP13.15□□□□□ -0.3
SDHA-210ENST00000509420 LACRTQ9GZZ8 138 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 APMAPQ9HDC9 416 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 BPIFA1Q9NP55 256 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 KLC4Q9NSK0 619 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 CPNE7Q9UBL6 633 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 WDR37Q9Y2I8 494 aa13.15□□□□□ -0.3
SDHA-210ENST00000509420 KIR2DS5A0A0G2JLQ3 304 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 A0A0G2JNG1 304 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 A0A0U1RQJ8 604 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 LILRA5A6NI73 299 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 SOWAHDA6NJG2 315 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 B4E171 279 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 KIR2DS3K7RE56 304 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
SDHA-210ENST00000509420 EPOP01588 193 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 C9P02748 559 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 ZNF7P17097 686 aaPredicted RBP13.14□□□□□ -0.31
SDHA-210ENST00000509420 CD82P27701 267 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 ADRA1AP35348 466 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 UGT1A3P35503 534 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 TSPAN7P41732 249 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 CTSCP53634 463 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 EPHA4P54764 986 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 GFERP55789 205 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 PEX6Q13608 980 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 TFDP2Q14188 446 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 PTPRCAPQ14761 206 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 KIR2DS5Q14953 304 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 SLC1A5Q15758 541 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 PPP2R5EQ16537 467 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 AADACL2Q6P093 401 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 RAD9BQ6WBX8 426 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 FAM83HQ6ZRV2 1179 aaPredicted RBP13.14□□□□□ -0.31
SDHA-210ENST00000509420 TIPARPQ7Z3E1 657 aaKnown RBP13.14□□□□□ -0.31
SDHA-210ENST00000509420 TMEM139Q8IV31 216 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 KLHDC8BQ8IXV7 354 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 LRRC57Q8N9N7 239 aa13.14□□□□□ -0.31
SDHA-210ENST00000509420 AGBL5Q8NDL9 886 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms