RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MINDY1Q8N5J2 469 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 FBXO36Q8NEA4 188 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 OR2I1PQ8NGU4 316 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 GPR150Q8NGU9 434 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 OR6P1Q8NGX9 317 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 TSACCQ96A04 125 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 PDXPQ96GD0 296 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CAAP1Q9H8G2 361 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 RMI1Q9H9A7 625 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 ARFGAP3Q9NP61 516 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 MRPL40Q9NQ50 206 aaKnown RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 DNAAF2Q9NVR5 837 aaKnown RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 ATXN10Q9UBB4 475 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CRLS1Q9UJA2 301 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CHMP2BQ9UQN3 213 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CD3EAPO15446 510 aaKnown RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 YKT6O15498 198 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 NUAK1O60285 661 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 MTX2O75431 263 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 RASGRP1O95267 797 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ASMTLO95671 621 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 TNFP01375 233 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF8P17098 575 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ARRB1P49407 418 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 BLKP51451 505 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 B4GALNT1Q00973 533 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 FRG1Q14331 258 aaKnown RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 SEMA3AQ14563 771 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 DBN1Q16643 649 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 LONRF1Q17RB8 773 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 PYCR3Q53H96 274 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 FASTKD1Q53R41 847 aaKnown RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ZNF542PQ5EBM4 170 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 LYPLAL1Q5VWZ2 237 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 DOK6Q6PKX4 331 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 UNC5AQ6ZN44 842 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 DBX2Q6ZNG2 339 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 TAS2R42Q7RTR8 314 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 KANSL1Q7Z3B3 1105 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 RELL1Q8IUW5 271 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ANKMY2Q8IV38 441 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ZBED8Q8IZ13 594 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 PHACTR4Q8IZ21 702 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 EIF1ADQ8N9N8 165 aaKnown RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 IFT81Q8WYA0 676 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 CCDC97Q96F63 343 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 EDEM2Q9BV94 578 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 GTPBP2Q9BX10 602 aaKnown RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 OR2AG1Q9H205 316 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 TCEAL2Q9H3H9 227 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ANKZF1Q9H8Y5 726 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 CYP4F12Q9HCS2 524 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 SAYSD1Q9NPB0 183 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 CATSPERZQ9NTU4 200 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 DNAJC28Q9NX36 388 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ZDHHC3Q9NYG2 299 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 MARCH4Q9P2E8 410 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 ZC3H7BQ9UGR2 993 aaKnown RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 SUFUQ9UMX1 484 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 PCYT1BQ9Y5K3 369 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-210ENST00000506767 BPTFQ12830 3046 aa12.7□□□□□ -0.38
TCOF1-210ENST00000506767 SGTAO43765 313 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 PCDHGA12O60330 932 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 PIAS2O75928 621 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 CDK14O94921 469 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 JUNDP17535 347 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
TCOF1-210ENST00000506767 ID4P47928 161 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 CCT8P50990 548 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 ATXN3P54252 364 aaPredicted RBP12.69□□□□□ -0.38
TCOF1-210ENST00000506767 HNRNPKP61978 463 aaKnown RBP eCLIP12.69□□□□□ -0.38
TCOF1-210ENST00000506767 BNIP3Q12983 259 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 ITIH4Q14624 930 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 PACS1Q6VY07 963 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 HID1Q8IV36 788 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 LMNTD2Q8IXW0 634 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 UNC5BQ8IZJ1 945 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 RBFAQ8N0V3 343 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 PNPLA1Q8N8W4 532 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 RASGEF1AQ8N9B8 481 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 GDAP1Q8TB36 358 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 SAP25Q8TEE9 199 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 PYROXD1Q8WU10 500 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 HEXDCQ8WVB3 486 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 COPS8Q99627 209 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 TSPYL1Q9H0U9 437 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 TMEM9BQ9NQ34 198 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 RRAGDQ9NQL2 400 aaPredicted RBP12.69□□□□□ -0.38
TCOF1-210ENST00000506767 TM7SF3Q9NS93 570 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 TRNAU1APQ9NX07 287 aaKnown RBP12.69□□□□□ -0.38
TCOF1-210ENST00000506767 IL1RAPL1Q9NZN1 696 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 MTRF1LQ9UGC7 380 aaKnown RBP12.69□□□□□ -0.38
TCOF1-210ENST00000506767 APOBEC3BQ9UH17 382 aaKnown RBP12.69□□□□□ -0.38
TCOF1-210ENST00000506767 GPR34Q9UPC5 381 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 PCDHGB2Q9Y5G2 931 aa12.69□□□□□ -0.38
TCOF1-210ENST00000506767 GOLGA8KD6RF30 607 aa12.68□□□□□ -0.38
TCOF1-210ENST00000506767 H3BM21 787 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms