RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ILF3Q12906 894 aaKnown RBP eCLIP7.2□□□□□ -1.26
GYPB-206ENST00000506516 OLIG2Q13516 323 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 SEMA5AQ13591 1074 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 ITGA9Q13797 1035 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 NR0B2Q15466 257 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 CYP1B1Q16678 543 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 DEFB133Q30KQ1 61 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 PAPD7Q5XG87 772 aaKnown RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 CCDC137Q6PK04 289 aaKnown RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 DOK6Q6PKX4 331 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 MARK2Q7KZI7 788 aaKnown RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 GALNT13Q8IUC8 556 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 PHYKPLQ8IUZ5 450 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 TTC30BQ8N4P2 665 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 FAM46DQ8NEK8 389 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 OR4K2Q8NGD2 314 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 OR6C4Q8NGE1 309 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GDAP1Q8TB36 358 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 ZNF398Q8TD17 642 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 COG1Q8WTW3 980 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 STYXQ8WUJ0 223 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 OR1E3Q8WZA6 343 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GLYATL1Q969I3 302 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 PDXPQ96GD0 296 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 SCARF2Q96GP6 870 aaPredicted RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 APOLD1Q96LR9 279 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 VPS35Q96QK1 796 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 LRRC61Q9BV99 259 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GSDMCQ9BYG8 508 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 CLPBQ9H078 707 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 TMEM168Q9H0V1 697 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 DPEP2Q9H4A9 486 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 FGF22Q9HCT0 170 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 IL26Q9NPH9 171 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 VPS18Q9P253 973 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GULP1Q9UBP9 304 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 CNOT6Q9ULM6 557 aaKnown RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 PNMA8BQ9ULN7 279 aaPredicted RBP7.2□□□□□ -1.26
GYPB-206ENST00000506516 TMEM98Q9Y2Y6 226 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 PCDHGA1Q9Y5H4 931 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 ARL5AQ9Y689 179 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GVINP1Q7Z2Y8 2422 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 GON4LQ3T8J9 2241 aa7.2□□□□□ -1.26
GYPB-206ENST00000506516 ADAMTS9Q9P2N4 1935 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 HEATR9A2RTY3 570 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 GRID2O43424 1007 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 BUD23O43709 281 aaKnown RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 NUAK1O60285 661 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 PHF2O75151 1096 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 RFPL3O75679 317 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 SRP72O76094 671 aaKnown RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 CDK14O94921 469 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 KRT14P02533 472 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 FUCA1P04066 466 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 GIMD1P0DJR0 217 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ACP1P24666 158 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ADRA1DP25100 572 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 CASQ1P31415 396 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ADCY8P40145 1251 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 NPY2RP49146 381 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 PSMA6P60900 246 aaKnown RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 CDK16Q00536 496 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 TMEM115Q12893 351 aaPredicted RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 DNAJC3Q13217 504 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 MSLNQ13421 630 aaPredicted RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 GTF2H3Q13889 308 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 LRP8Q14114 963 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 POU6F1Q14863 301 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 CHRNA6Q15825 494 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 SKIDA1Q1XH10 827 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ATP13A5Q4VNC0 1218 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 PYCR3Q53H96 274 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 CCDC157Q569K6 752 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 LDLRAP1Q5SW96 308 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 TMEM214Q6NUQ4 689 aaKnown RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 TTC27Q6P3X3 843 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 OGFOD3Q6PK18 319 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 FAM151BQ6UXP7 276 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 CHST15Q7LFX5 561 aaPredicted RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 NLRP9Q7RTR0 991 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 PRUNE1Q86TP1 453 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 SLCO6A1Q86UG4 719 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 TRIM74Q86UV6 250 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 GALNT15Q8N3T1 639 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ARL10Q8N8L6 244 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 GLIS1Q8NBF1 620 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 OR52K1Q8NGK4 314 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 GPBAR1Q8TDU6 330 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ADAMTS14Q8WXS8 1223 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 TRIM44Q96DX7 344 aaPredicted RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 CAPZA3Q96KX2 299 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 RUNDC3BQ96NL0 473 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 OR2M4Q96R27 311 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 BOCQ9BWV1 1114 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ZCCHC2Q9C0B9 1178 aaKnown RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 ABCG4Q9H172 646 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 OR2AG1Q9H205 316 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 ASB8Q9H765 288 aa7.19□□□□□ -1.26
GYPB-206ENST00000506516 SUDS3Q9H7L9 328 aaPredicted RBP7.19□□□□□ -1.26
GYPB-206ENST00000506516 EIF2B3Q9NR50 452 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms