RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GPSM1Q86YR5 675 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MMP21Q8N119 569 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 SPATA6LQ8N4H0 392 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZBTB8BQ8NAP8 495 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 FAM98AQ8NCA5 519 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 Q8NFD4 153 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 GOT1L1Q8NHS2 421 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMEM163Q8TC26 289 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMEM174Q8WUU8 243 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 SIPA1Q96FS4 1042 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 METTL2AQ96IZ6 378 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CFAP57Q96MR6 1250 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 GBP5Q96PP8 586 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 PRAM1Q96QH2 718 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CDRT15Q96T59 188 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MSTO1Q9BUK6 570 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 RTN4RQ9BZR6 473 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MMP27Q9H306 513 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 EPB41L5Q9HCM4 733 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MKKSQ9NPJ1 570 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MTMR10Q9NXD2 777 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 SELENONQ9NZV5 590 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 OR14J1Q9UGF5 321 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNHIT2Q9UHR6 403 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 RASAL2Q9UJF2 1139 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 OSGIN1Q9UJX0 560 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 RCOR1Q9UKL0 485 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF148Q9UQR1 794 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CLIC4Q9Y696 253 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 STON1Q9Y6Q2 735 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 PPLO60437 1756 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 RPGRIP1LQ68CZ1 1315 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 SMIM35A0A1B0GVV1 85 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 A0A1W2PR77 199 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 KANSL1LA0AUZ9 987 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 A6NNC1 897 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ATP2A1O14983 1001 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MDM4O15151 490 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 SMAD9O15198 467 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 TLR2O60603 784 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 BCAR3O75815 825 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 RSL1D1O76021 490 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 FTCDO95954 541 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 IFNA2P01563 188 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 FYNP06241 537 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 GJA1P17302 382 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ERCC2P18074 760 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MUTP22033 750 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MPGP29372 298 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 TNNT3P45378 269 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 RBP5P82980 135 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 PLIN5Q00G26 463 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 DPTQ07507 201 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ST3GAL1Q11201 340 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 SREBF2Q12772 1141 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 BFSP1Q12934 665 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 CAMK2DQ13557 499 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 IL11RAQ14626 422 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 DAZAP2Q15038 168 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 LETM2Q2VYF4 491 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF805Q5CZA5 627 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 KRBOX4Q5JUW0 171 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 Q5PR19 223 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MTSS1LQ765P7 747 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MON1BQ7L1V2 547 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 CAMKMTQ7Z624 323 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 DNAJB7Q7Z6W7 309 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 SDCCAG8Q86SQ7 713 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 METTL23Q86XA0 190 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ANKRD13BQ86YJ7 626 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 UNC5CLQ8IV45 518 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 CNGA4Q8IV77 575 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 CEP97Q8IW35 865 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 TC2NQ8N9U0 490 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 IGFBPL1Q8WX77 278 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 LPGAT1Q92604 370 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ERGIC1Q969X5 290 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 EGLN2Q96KS0 407 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 JAKMIP1Q96N16 626 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 SH3GL2Q99962 352 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 WDR77Q9BQA1 342 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 SEMA4CQ9C0C4 833 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ANKRD2Q9GZV1 360 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 SPATC1LQ9H0A9 340 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MAGIXQ9H6Y5 334 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 DNAJC18Q9H819 358 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MAP6D1Q9H9H5 199 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMEM184CQ9NVA4 438 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 MSRB1Q9NZV6 116 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 CRNNQ9UBG3 495 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 DNAJB4Q9UDY4 337 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 HACL1Q9UJ83 578 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 TUBE1Q9UJT0 475 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 DBNLQ9UJU6 430 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ING1Q9UK53 422 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 TTC7AQ9ULT0 858 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 DMRT1Q9Y5R6 373 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 BLMP54132 1417 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 FMN2Q9NZ56 1722 aa3.24□□□□□ -1.89
TRAPPC11-205ENST00000506426 ABCC11Q96J66 1382 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms