RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ACTN2P35609 894 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 GNL1P36915 607 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 MRPL12P52815 198 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 MFAP4P55083 255 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 MRPS5P82675 430 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 COG7P83436 770 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 CHAF1BQ13112 559 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 ACVR2BQ13705 512 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 DLG2Q15700 870 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 MYLK3Q32MK0 819 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 KRTCAP3Q53RY4 240 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 PLEKHS1Q5SXH7 462 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 RARS2Q5T160 578 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 TRNP1Q6NT89 227 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 UNQ6126/PRO20091Q6UXV3 157 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 ATG9AQ7Z3C6 839 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 TMPRSS12Q86WS5 348 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 TAGAPQ8N103 731 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 EMC1Q8N766 993 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 BBS10Q8TAM1 723 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 GSDMBQ8TAX9 411 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 SPATA20Q8TB22 786 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 UTP15Q8TED0 518 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 SORCS1Q8WY21 1168 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 CALML4Q96GE6 196 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 IL17FQ96PD4 163 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 CCDC68Q9H2F9 335 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 DBNLQ9UJU6 430 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 RALYQ9UKM9 306 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 B3GALT5Q9Y2C3 310 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 OR2W1Q9Y3N9 320 aa3.95□□□□□ -1.78
TOPBP1-204ENST00000505804 DENND3A2RUS2 1198 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SMTNL1A8MU46 457 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 CTDSP2O14595 271 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 LDB3O75112 727 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SNRNP70P08621 437 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SELLP14151 372 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 HRH2P25021 359 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 CCKBRP32239 447 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 MMP14P50281 582 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SUOXP51687 545 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 FUT6P51993 359 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 RRP1P56182 461 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SNX16P57768 344 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 PSMC6P62333 389 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 PPP2R2BQ00005 443 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SPOCK1Q08629 439 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 GTF2H2Q13888 395 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 IRAK1BP1Q5VVH5 260 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 GTF2H2CQ6P1K8 395 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 CLEC4GQ6UXB4 293 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 RAD9BQ6WBX8 426 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 TUBA1AQ71U36 451 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 PCGF5Q86SE9 256 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 CEP97Q8IW35 865 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SCYL3Q8IZE3 742 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 THAP6Q8TBB0 222 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 SLC38A5Q8WUX1 472 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 DNAAF4Q8WXU2 420 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 RSRC1Q96IZ7 334 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 FAM84BQ96KN1 310 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 TTC14Q96N46 770 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 CTAGE1Q96RT6 745 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 GFI1Q99684 422 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 TUBA1CQ9BQE3 449 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 C1QTNF1Q9BXJ1 281 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 HRH4Q9H3N8 390 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 RETREG1Q9H6L5 497 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 POU2F3Q9UKI9 436 aa3.94□□□□□ -1.78
TOPBP1-204ENST00000505804 A0A1W2PP11 408 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 A0A1W2PR77 199 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 OR2A25A4D2G3 310 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 K7ENM7 598 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 MAP2K7O14733 419 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 IKBKBO14920 756 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 SLC16A5O15375 505 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 AHCYL1O43865 530 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 MITFO75030 526 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 ZNF217O75362 1048 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 CDH1P12830 882 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 SLC15A1P46059 708 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 AMPHP49418 695 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 ZNF132P52740 706 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 CD81P60033 236 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 EPS8Q12929 822 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 KCNC3Q14003 757 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 SYT16Q17RD7 645 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 TMEM35AQ53FP2 167 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 ASB18Q6ZVZ8 466 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 AACSQ86V21 672 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 KMT5CQ86Y97 462 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 ARID3BQ8IVW6 561 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 POC5Q8NA72 575 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 SLC38A9Q8NBW4 561 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 KCNH5Q8NCM2 988 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 LRRC59Q96AG4 307 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 MOAP1Q96BY2 351 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 LMLNQ96KR4 655 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 DOCK7Q96N67 2140 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms