RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 EXT2Q93063 718 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 SAMD11Q96NU1 681 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 PLEKHG4BQ96PX9 1271 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 PANX3Q96QZ0 392 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 BBS2Q9BXC9 721 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 MID1IP1Q9NPA3 183 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 LATS2Q9NRM7 1088 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 PLK2Q9NYY3 685 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 HECAQ9UBI9 543 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 SLC8A2Q9UPR5 921 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 LRRC42Q9Y546 428 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 UBFD1O14562 309 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 MOSPD3O75425 235 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 S100BP04271 92 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 JUNP05412 331 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 CBSLP0DN79 551 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 GJA1P17302 382 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 CBSP35520 551 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 MRPL19P49406 292 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 NUDT2P50583 147 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 PKNOX1P55347 436 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 ECT2LQ008S8 904 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 ART3Q13508 389 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 UGT3A2Q3SY77 523 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 UBE2Q1Q7Z7E8 422 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 SIDT2Q8NBJ9 832 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 EID2BQ96D98 161 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 SLC25A23Q9BV35 468 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 MRPL1Q9BYD6 325 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 ACSS2Q9NR19 701 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 CRLS1Q9UJA2 301 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 CLEC4EQ9ULY5 219 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 NPEPPSL1A6NEC2 478 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 BBIP1A8MTZ0 92 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 OR1I1O60431 355 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 ZNF30P17039 623 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 PTDSS1P48651 473 aaKnown RBP17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 SH3BP2P78314 561 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 GRIK2Q13002 908 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 PTK2BQ14289 1009 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 TTC23LQ6PF05 361 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 BRAT1Q6PJG6 821 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 BNC2Q6ZN30 1099 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 TTC16Q8NEE8 873 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 HCAR2Q8TDS4 363 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 IL26Q9NPH9 171 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 GAPDHSO14556 408 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 KRT36O76013 467 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 NNMTP40261 264 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 GEN1Q17RS7 908 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 PRSS36Q5K4E3 855 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 FAM151BQ6UXP7 276 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 HACD2Q6Y1H2 254 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 DSELQ8IZU8 1212 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 MYO1HQ8N1T3 1032 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 MICAL1Q8TDZ2 1067 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 WFIKKN2Q8TEU8 576 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 ASIC4Q96FT7 647 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 LRIG1Q96JA1 1093 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 PPP1R36Q96LQ0 422 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 SMIM14Q96QK8 99 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 TNKS2Q9H2K2 1166 aa17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 CXXC1Q9P0U4 656 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC11-204ENST00000505676 H0Y3Z8 333 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 PSMD12O00232 456 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 CDC7O00311 574 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 RAD51BO15315 384 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 CRCPO75575 148 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 ESRRBO95718 433 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 ASLP04424 464 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 UROSP10746 265 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 BPIP17213 487 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 NSG1P42857 185 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 CCNHP51946 323 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 FASTKQ14296 549 aaKnown RBP17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 PCBP2Q15366 365 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 GSTA3Q16772 222 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 CDKL4Q5MAI5 379 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 FRA10AC1Q70Z53 315 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 TMEM25Q86YD3 366 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 CPNE9Q8IYJ1 553 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 NXPE1Q8N323 547 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 OR6K2Q8NGY2 324 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 GIMAP7Q8NHV1 300 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 TSPEARQ8WU66 669 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 EEF1AKMT1Q8WVE0 214 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 TWIST2Q8WVJ9 160 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 HCFC1R1Q9NWW0 138 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 PCTPQ9UKL6 214 aa17.1■□□□□ 0.33
TRAPPC11-204ENST00000505676 NEDD8-MDP1E9PL57 170 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 AIM2O14862 343 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 CLDN7O95471 211 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 CYP2A6P11509 494 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 PSMD8P48556 350 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 TMEM198Q66K66 360 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 OGFOD2Q6N063 350 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 SPATA19Q7Z5L4 167 aa17.09■□□□□ 0.33
TRAPPC11-204ENST00000505676 ZNF382Q96SR6 550 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms