RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MC4RP32245 332 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 ARHGEF7Q14155 803 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLMAPQ14BN4 828 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 ELF2Q15723 593 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPRC6AQ5T6X5 926 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 CAPRIN2Q6IMN6 1127 aaKnown RBP8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 EMBQ6PCB8 327 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 Q6ZSR6 202 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 BLOC1S5Q8TDH9 187 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 FMO2Q99518 471 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 SEMA5BQ9P283 1151 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC6A14Q9UN76 642 aa8.19□□□□□ -1.1
CDC42SE2-208ENST00000505065 ARHGAP33O14559 1287 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 LMNAP02545 664 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PNLIPP16233 465 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF8P17098 575 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ACADLP28330 430 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 MPLP40238 635 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 CRADDP78560 199 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 GRIK2Q13002 908 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PROX2Q3B8N5 592 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PARGQ86W56 976 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 HEATR4Q86WZ0 1026 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PHYKPLQ8IUZ5 450 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR56A4Q8NGH8 313 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR2L2Q8NH16 312 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF398Q8TD17 642 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 DCAKDQ8WVC6 231 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR1E3Q8WZA6 343 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 HDAC10Q969S8 669 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF514Q96K75 400 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 WDR92Q96MX6 357 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PHOX2BQ99453 314 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 CDC42EP4Q9H3Q1 356 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PPCSQ9HAB8 311 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 R4GN57 208 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ESYT3A0FGR9 886 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 CD3EAPO15446 510 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 TSPAN12O95859 305 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PAK4O96013 591 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC1A2P43004 574 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 CSE1LP55060 971 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 RPA4Q13156 261 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ACOX1Q15067 660 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 TRMT10BQ6PF06 316 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 SERAC1Q96JX3 654 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPR63Q9BZJ6 419 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 WDR26Q9H7D7 661 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 FGF22Q9HCT0 170 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 CATSPERZQ9NTU4 200 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 NSMCE4AQ9NXX6 385 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 LGALS13Q9UHV8 139 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 EIF2B4Q9UI10 523 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 KLK4Q9Y5K2 254 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PRSS21Q9Y6M0 314 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 WDR87Q6ZQQ6 2873 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 E7EVH7 732 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 F5H423 210 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 AOAHP28039 575 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 EPHA8P29322 1005 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 CD151P48509 253 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 UBE2IP63279 158 aaKnown RBP8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 ABRAXAS1Q6UWZ7 409 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPR22Q99680 433 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 LRRC61Q9BV99 259 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR52A5Q9H2C5 316 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 MKS1Q9NXB0 559 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 PCDHB1Q9Y5F3 818 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 SNX11Q9Y5W9 270 aa8.18□□□□□ -1.1
CDC42SE2-208ENST00000505065 MAP3K13O43283 966 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PIAS2O75928 621 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PRSS56P0CW18 603 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 TTPAP49638 278 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SEMG2Q02383 582 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 METRNLQ641Q3 311 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CLEC14AQ86T13 490 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC44A1Q8WWI5 657 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 DPH5Q9H2P9 285 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CXorf49A8MYA2 514 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 QSOX1O00391 747 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 MATN4O95460 622 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CD59P13987 128 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ATP1B2P14415 290 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 KCNA4P22459 653 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 NSG1P42857 185 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 EPHB1P54762 984 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CLDN2P57739 230 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SRP54P61011 504 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 MGAT5Q09328 741 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PDIA2Q13087 525 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CALCOCO2Q13137 446 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 AARS2Q5JTZ9 985 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ADGRD1Q6QNK2 874 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ASCL5Q7RTU5 278 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM124AQ86V42 546 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZC3HC1Q86WB0 502 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms