RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 RTL3Q8N8U3 475 aaKnown RBP5.94□□□□□ -1.46
GYPB-204ENST00000504951 TMEM35BQ8NCS4 154 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 FDCSPQ8NFU4 85 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 OR8K5Q8NH50 307 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 JOSD2Q8TAC2 188 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 GPT2Q8TD30 523 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 CT55Q8WUE5 264 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 PDCD6IPQ8WUM4 868 aaKnown RBP5.94□□□□□ -1.46
GYPB-204ENST00000504951 UBE2Q2Q8WVN8 375 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 TBC1D31Q96DN5 1066 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 C19orf60Q96EN9 201 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 COX14Q96I36 57 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 SLC41A2Q96JW4 573 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 NCAPGQ9BPX3 1015 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 NAA15Q9BXJ9 866 aaKnown RBP5.94□□□□□ -1.46
GYPB-204ENST00000504951 KLC2Q9H0B6 622 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 NDST4Q9H3R1 872 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 METTL5Q9NRN9 209 aaKnown RBP5.94□□□□□ -1.46
GYPB-204ENST00000504951 AGPAT4Q9NRZ5 378 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 ASF1BQ9NVP2 202 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 VPS18Q9P253 973 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 RCOR3Q9P2K3 495 aaPredicted RBP5.94□□□□□ -1.46
GYPB-204ENST00000504951 DNAI1Q9UI46 699 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 TNRC6AQ8NDV7 1962 aaKnown RBP5.94□□□□□ -1.46
GYPB-204ENST00000504951 SEC16AO15027 2179 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 PKDREJQ9NTG1 2253 aa5.94□□□□□ -1.46
GYPB-204ENST00000504951 NIPBLQ6KC79 2804 aaeCLIP5.93□□□□□ -1.46
GYPB-204ENST00000504951 A0A1B0GTL3 188 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 ARHGAP10A1A4S6 786 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 EPHB6O15197 1021 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 PRAMEF11O60813 436 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 SOCS5O75159 536 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 PIGNO95427 931 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 FGFR1OPO95684 399 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 LSM8O95777 96 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 SOD1P00441 154 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 F3P13726 295 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 EDN3P14138 238 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 BPIP17213 487 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 HOXB4P17483 251 aaPredicted RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 HADHAP40939 763 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 PTPN9P43378 593 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 KLK7P49862 253 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 AP1S1P61966 158 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 UBE2IP63279 158 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 BCL2L1Q07817 233 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 ZNF630Q2M218 657 aaPredicted RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 DPCR1Q3MIW9 517 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 VWA3BQ502W6 1294 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 CFAP58Q5T655 872 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 KLHDC7AQ5VTJ3 777 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 CPZQ66K79 652 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 FCRL6Q6DN72 434 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 RWDD4Q6NW29 188 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 KCNMB4Q86W47 210 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 RASGRP3Q8IV61 690 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 CARFQ8N187 725 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 PYROXD2Q8N2H3 581 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 CISD2Q8N5K1 135 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 ARFGAP1Q8N6T3 406 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 SLC30A5Q8TAD4 765 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 EPS8L1Q8TE68 723 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 LRRN4Q8WUT4 740 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 RXFP2Q8WXD0 754 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 UBXN4Q92575 508 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 NACC2Q96BF6 587 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 NUS1Q96E22 293 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 ZNF837Q96EG3 531 aaPredicted RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 SCRN2Q96FV2 425 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 ZDHHC12Q96GR4 267 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 EXOC2Q96KP1 924 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 OR6C1Q96RD1 312 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 MCCC1Q96RQ3 725 aaPredicted RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 PCDHB18PQ96TA0 734 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 SPOCK3Q9BQ16 436 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 NUDT9Q9BW91 350 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 NLNQ9BYT8 704 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 PDCL3Q9H2J4 239 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 LRRC19Q9H756 370 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 PDE7BQ9NP56 450 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 GPR83Q9NYM4 423 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 OGFRQ9NZT2 677 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 CPNE7Q9UBL6 633 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 UBA2Q9UBT2 640 aaPredicted RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 MOSPD1Q9UJG1 213 aa5.93□□□□□ -1.46
GYPB-204ENST00000504951 NOCTQ9UK39 431 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 COPG1Q9Y678 874 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 ANKHD1Q8IWZ3 2542 aaKnown RBP5.93□□□□□ -1.46
GYPB-204ENST00000504951 PCSK5Q92824 1860 aa5.92□□□□□ -1.46
GYPB-204ENST00000504951 ARGFXA6NJG6 315 aa5.92□□□□□ -1.46
GYPB-204ENST00000504951 C2CD4BA6NLJ0 364 aa5.92□□□□□ -1.46
GYPB-204ENST00000504951 EIF3CLB5ME19 914 aaKnown RBP5.92□□□□□ -1.46
GYPB-204ENST00000504951 GPR89AB7ZAQ6 455 aa5.92□□□□□ -1.46
GYPB-204ENST00000504951 F8VZ95 297 aa5.92□□□□□ -1.46
GYPB-204ENST00000504951 FGF10O15520 208 aaPredicted RBP5.92□□□□□ -1.46
GYPB-204ENST00000504951 LRRTM2O43300 516 aa5.92□□□□□ -1.46
GYPB-204ENST00000504951 KRT86O43790 486 aa5.92□□□□□ -1.46
GYPB-204ENST00000504951 VEGFDO43915 354 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms