RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TMEM233B4DJY2 109 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 HOXD8P13378 290 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 CNTN1Q12860 1018 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 TMEM220Q6QAJ8 160 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 ULK2Q8IYT8 1036 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 TNIP2Q8NFZ5 429 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 TWIST2Q8WVJ9 160 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 RHBGQ9H310 441 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 POLR3HQ9Y535 204 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 TRAFD1O14545 582 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 FFAR2O15552 330 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 SMNDC1O75940 238 aaKnown RBP eCLIP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 CYP4F2P78329 520 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 BNIP1Q12981 228 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 MAGEC3Q8TD91 643 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 APOLD1Q96LR9 279 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 MFSD1Q9H3U5 465 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 RNPEPL1Q9HAU8 725 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 INVSQ9Y283 1065 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 BACE2Q9Y5Z0 518 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
TCOF1-207ENST00000504761 COL11A2P13942 1736 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-207ENST00000504761 A0A0U1RQS6 177 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF839A8K0R7 811 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 PSMG1O95456 288 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 OGNP20774 298 aaKnown RBP13.98□□□□□ -0.17
TCOF1-207ENST00000504761 SLC7A2P52569 658 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 NIPAL4Q0D2K0 466 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 GRM2Q14416 872 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 GCNT7Q6ZNI0 430 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF786Q8N393 782 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 RP9Q8TA86 221 aaKnown RBP13.98□□□□□ -0.17
TCOF1-207ENST00000504761 SPPL2AQ8TCT8 520 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 A0A1W2PQ67 120 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ISM1B1AKI9 464 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ATG13O75143 517 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 TIMP1P01033 207 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ADH5P11766 374 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 DMC1Q14565 340 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 GDPD4Q6W3E5 623 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 DCAF4L2Q8NA75 395 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 FBXO30Q8TB52 745 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 CDK15Q96Q40 435 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 KIFC1Q9BW19 673 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF556Q9HAH1 456 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 SPATS2LQ9NUQ6 558 aaKnown RBP13.98□□□□□ -0.17
TCOF1-207ENST00000504761 E7ESA3 106 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 QSOX1O00391 747 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 AXIN1O15169 862 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 GSC2O15499 205 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 CTGFP29279 349 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 TIE1P35590 1138 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 PRKAG1P54619 331 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 GSCP56915 257 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-207ENST00000504761 PWP1Q13610 501 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 BPIFB1Q8TDL5 484 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 TPD52L3Q96J77 140 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 PPP3R2Q96LZ3 170 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 HCFC1R1Q9NWW0 138 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 FNIP2Q9P278 1114 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 DLX3O60479 287 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 CAPN1P07384 714 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ELP6Q0PNE2 266 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 CCDC85BQ15834 202 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-207ENST00000504761 PAGE2BQ5JRK9 111 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 LRRC74BQ6ZQY2 392 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 TMPRSS11BQ86T26 416 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 HPS6Q86YV9 775 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 FAM13CQ8NE31 585 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 COL26A1Q96A83 441 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 TIFAQ96CG3 184 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 CXorf40BQ96DE9 158 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 PSKH2Q96QS6 385 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 FERD3LQ96RJ6 166 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 KLHL4Q9C0H6 718 aa13.98□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF490Q9ULM2 529 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-207ENST00000504761 A0A0J9YYE9 177 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 CDC7O00311 574 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 RFPL1O75677 317 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 TGDSO95455 350 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 POU1F1P28069 291 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 NSG1P42857 185 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 CCR10P46092 362 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 IDH3AP50213 366 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 LCP2Q13094 533 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 MYLK3Q32MK0 819 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 VITQ6UXI7 678 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 CMTR2Q8IYT2 770 aaKnown RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 IMP4Q96G21 291 aaKnown RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 HHIPL1Q96JK4 782 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 SEC24AO95486 1093 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 FASP25445 335 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 GSSP48637 474 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 ERVK-21P61565 698 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 WDR5P61964 334 aaKnown RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 IRX1P78414 480 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF33AQ06730 810 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 LMAN2Q12907 356 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 RALGDSQ12967 914 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms