RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 LDLRAP1Q5SW96 308 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 FNBP1LQ5T0N5 605 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 KANSL1Q7Z3B3 1105 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 SNX20Q7Z614 316 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 TRIM74Q86UV6 250 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 HID1Q8IV36 788 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 PHACTR4Q8IZ21 702 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 PDIK1LQ8N165 341 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 DDHD1Q8NEL9 900 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 NETO1Q8TDF5 533 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 SAP25Q8TEE9 199 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 HDAC10Q969S8 669 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 TSACCQ96A04 125 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 ULK4Q96C45 1275 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 SLC13A1Q9BZW2 595 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 DPH5Q9H2P9 285 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 SUDS3Q9H7L9 328 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 RMI1Q9H9A7 625 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 GRHL1Q9NZI5 618 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 SAMD15Q9P1V8 674 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 SLC2A6Q9UGQ3 507 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 TMEM98Q9Y2Y6 226 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 CSNK1G3Q9Y6M4 447 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 PCM1Q15154 2024 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 VEGFDO43915 354 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 DNAJC6O75061 913 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 PIAS2O75928 621 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 ASMTLO95671 621 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 DGKAP23743 735 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 FOXN2P32314 431 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 CA5AP35218 305 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 POLD2P49005 469 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 ARL4CP56559 192 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 PRAMEP78395 509 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 CACNG1Q06432 222 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 TMEM115Q12893 351 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 BNIP3Q12983 259 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 SUZ12Q15022 739 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 HIF1AQ16665 826 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 MSS51Q4VC12 460 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 ZNF542PQ5EBM4 170 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 GPRC6AQ5T6X5 926 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 KCTD16Q68DU8 428 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 AFTPHQ6ULP2 937 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 ADGRG6Q86SQ4 1221 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 TMEM135Q86UB9 458 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 AGGF1Q8N302 714 aaeCLIP11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 NXPE1Q8N323 547 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 SDR16C5Q8N3Y7 309 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 HEXDCQ8WVB3 486 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 ART4Q93070 314 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 LRRC39Q96DD0 335 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 MFSD3Q96ES6 412 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 PDXPQ96GD0 296 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 NAT9Q9BTE0 207 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 CYP4F12Q9HCS2 524 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 MRPL40Q9NQ50 206 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 TRNAU1APQ9NX07 287 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 ATXN10Q9UBB4 475 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 SPASTQ9UBP0 616 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 APOBEC3BQ9UH17 382 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 CRLS1Q9UJA2 301 aa11.78□□□□□ -0.52
PDLIM5-208ENST00000504489 E7ESA3 106 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 CHUKO15111 745 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 GPR39O43194 453 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 NUAK1O60285 661 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 USP1O94782 785 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 GOT2P00505 430 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 CD59P13987 128 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 CTSEP14091 401 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 PAMP19021 973 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 MLLT3P42568 568 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 IL9RQ01113 521 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 DHX9Q08211 1270 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 ELOCQ15369 112 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 UAP1L1Q3KQV9 507 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 BBS9Q3SYG4 887 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 ANKRD20A4Q4UJ75 823 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 KHDC1Q4VXA5 237 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 PYCR3Q53H96 274 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 ZRANB3Q5FWF4 1079 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 KIAA0930Q6ICG6 404 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 DOK6Q6PKX4 331 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 RD3Q7Z3Z2 195 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 CCNJLQ8IV13 435 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 RBFAQ8N0V3 343 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 SLC25A45Q8N413 288 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 FSTL5Q8N475 847 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 OR6P1Q8NGX9 317 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 OR4L1Q8NH43 312 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 GDAP1Q8TB36 358 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 STAMBPL1Q96FJ0 436 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 EBNA1BP2Q99848 306 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 LRRC61Q9BV99 259 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 ZCCHC2Q9C0B9 1178 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 TCEAL2Q9H3H9 227 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 CAAP1Q9H8G2 361 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms