RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PSMA8Q8TAA3 256 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 RAB23Q9ULC3 237 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 RAB26Q9ULW5 256 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 COQ6Q9Y2Z9 468 aa16.43■□□□□ 0.22
PCDHA1-203ENST00000504120 ZBTB48P10074 688 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 IL10RBQ08334 325 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 MED22Q15528 200 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 PYDC2Q56P42 97 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 RFWD3Q6PCD5 774 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 OR10G6Q8NH81 332 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 SPATA22Q8NHS9 363 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 PIH1D2Q8WWB5 315 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 SIX2Q9NPC8 291 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 MRPS7Q9Y2R9 242 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 ARL5CA6NH57 179 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 INSIG1O15503 277 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 CYP4B1P13584 511 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 MSX2P35548 267 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 MTHFRP42898 656 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 NRG1Q02297 640 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 SLC20A2Q08357 652 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 QPRTQ15274 297 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 CCNYL2Q5T2Q4 361 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 FAM92BQ6ZTR7 304 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 AGAP2Q99490 1192 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 RBM4BQ9BQ04 359 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 RBM4Q9BWF3 364 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 UNC93B1Q9H1C4 597 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 XPNPEP1Q9NQW7 623 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 IGSF9Q9P2J2 1179 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 TIMM22Q9Y584 194 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 H3BNH8 94 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 IFNGP01579 166 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 SPATA31D3P0C874 917 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 HNMTP50135 292 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 DDI2Q5TDH0 399 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 SPATA31D4Q6ZUB0 917 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 ZNF483Q8TF39 744 aaPredicted RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 POLE3Q9NRF9 147 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 INTS7Q9NVH2 962 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 ELOVL7A1L3X0 281 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 TNFRSF21O75509 655 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 PRAMEF1O95521 474 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 RALGDSQ12967 914 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 LAPTM5Q13571 262 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 IL23RQ5VWK5 629 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 DENND6AQ8IWF6 608 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 RNASE11Q8TAA1 199 aaKnown RBP16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 LPGAT1Q92604 370 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 AP2M1Q96CW1 435 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 MCMBPQ9BTE3 642 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 MFSD1Q9H3U5 465 aa16.42■□□□□ 0.22
PCDHA1-203ENST00000504120 UBE2QL1A1L167 161 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 FECHP22830 423 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 KCNA10Q16322 511 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 VPS26BQ4G0F5 336 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 PERM1Q5SV97 790 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 C9orf64Q5T6V5 341 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 CPA6Q8N4T0 437 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 HMCESQ96FZ2 354 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 FZD8Q9H461 694 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 ZFP37Q9Y6Q3 630 aaPredicted RBP16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 PRNPP04156 253 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 SMPD1P17405 629 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 RPIAP49247 311 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 SLC10A6Q3KNW5 377 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 SWT1Q5T5J6 900 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 PLPP4Q5VZY2 271 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 FUT10Q6P4F1 479 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 PIK3C3Q8NEB9 887 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 DEFB118Q96PH6 123 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 GRHL1Q9NZI5 618 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 RAPGEFL1Q9UHV5 662 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3DA0A087WVF3 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3IA0A087WXS9 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3EA0A087X179 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3KA0A087X1G2 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3FA6NER0 549 aaPredicted RBP16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3LB9A6J9 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 FPGTO14772 594 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 NPHS1O60500 1241 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3HP0C7X1 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 NMBRP28336 390 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 CTSKP43235 329 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 ASPAP45381 313 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 REP15Q6BDI9 236 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3GQ6DHY5 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3CQ6IPX1 549 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 TBC1D3Q8IZP1 549 aaPredicted RBP16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 SRFBP1Q8NEF9 429 aaKnown RBP16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 PLD4Q96BZ4 506 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 OMA1Q96E52 524 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 KIFC1Q9BW19 673 aa16.41■□□□□ 0.22
PCDHA1-203ENST00000504120 FAM83DQ9H4H8 585 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms