RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PGBD5Q8N414 524 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 TTC30BQ8N4P2 665 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 POC5Q8NA72 575 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 CLEC18CQ8NCF0 446 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR1J2Q8NGS2 313 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 HMGCLL1Q8TB92 370 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 HM13Q8TCT9 377 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 FAM216AQ8WUB2 273 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 TMED6Q8WW62 240 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 TAF15Q92804 592 aaKnown RBP eCLIP2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 APBB2Q92870 758 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 NEUROG1Q92886 237 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 MOAP1Q96BY2 351 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 MTBPQ96DY7 904 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 NUDCD1Q96RS6 583 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 CSF3RQ99062 836 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 C1QTNF1Q9BXJ1 281 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 HRH4Q9H3N8 390 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 EPB41L5Q9HCM4 733 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 PDE7BQ9NP56 450 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 PLSCR4Q9NRQ2 329 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 OCIAD1Q9NX40 245 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 NKIRAS2Q9NYR9 191 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 KCNG2Q9UJ96 466 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 FBXW11Q9UKB1 542 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACSL5Q9ULC5 683 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 LOXL2Q9Y4K0 774 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 WDR81Q562E7 1941 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 ARHGEF40Q8TER5 1519 aa2.42□□□□□ -2.02
HMGB1P35-201ENST00000503360 IGLV5-52A0A0A0MRZ9 124 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 KANSL1LA0AUZ9 987 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR2A25A4D2G3 310 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 LRRC72A6NJI9 287 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 EIF4E1BA6NMX2 242 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SMAD9O15198 467 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SPINT2O43291 252 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 MITFO75030 526 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 ERAL1O75616 437 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GAGE7O76087 117 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACAA1P09110 424 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GAGE12FP0CL80 117 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GAGE12GP0CL81 117 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GAGE12IP0CL82 117 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 IGHV4-30-4P0DP06 118 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SRCP12931 536 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 TCEA1P23193 301 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 KRT20P35900 424 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 NNMTP40261 264 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 MSH2P43246 934 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 NRIP1P48552 1158 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GPR143P51810 404 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 DSCR9P59020 149 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SEC61BP60468 96 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SREBF2Q12772 1141 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GRSF1Q12849 480 aaKnown RBP eCLIP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GAGE1Q13065 139 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GAGE4Q13068 117 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 MAD2L1Q13257 205 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 KCNC3Q14003 757 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 BECN1Q14457 450 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 PSMD6Q15008 389 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 DLG2Q15700 870 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 HLFQ16534 295 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 ATP13A5Q4VNC0 1218 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 KCNT1Q5JUK3 1230 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 RARS2Q5T160 578 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 ARMC3Q5W041 872 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 NSUN5P2Q63ZY6 315 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 FRG2Q64ET8 278 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 RGMBQ6NW40 437 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 TMCO3Q6UWJ1 677 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 GALNT5Q7Z7M9 940 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 CCDC190Q86UF4 302 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 AACSQ86V21 672 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 KBTBD6Q86V97 674 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 LINC00346Q8IVM7 164 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 ARID3BQ8IVW6 561 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 CHERPQ8IWX8 916 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SCYL3Q8IZE3 742 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SCML4Q8N228 414 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 CLIP4Q8N3C7 705 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 PCDH20Q8N6Y1 951 aaKnown RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 LSMEM1Q8N8F7 131 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 IL17RCQ8NAC3 791 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR2AK2Q8NG84 335 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SLC22A18Q96BI1 424 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 RHBDF1Q96CC6 855 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SCMH1Q96GD3 660 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 CCDC34Q96HJ3 373 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 C3orf30Q96M34 536 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR1F2PQ96R84 312 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 CMKLR1Q99788 373 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 TEX12Q9BXU0 123 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SEZ6LQ9BYH1 1024 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SPRY4Q9C004 299 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 SIL1Q9H173 461 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 C6orf106Q9H6K1 298 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 MAGIXQ9H6Y5 334 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 PAG1Q9NWQ8 432 aa2.41□□□□□ -2.02
HMGB1P35-201ENST00000503360 ARHGEF38Q9NXL2 777 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms