RNA–Protein interactions for RNA: ENST00000503079.6

SMN1-203, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5 BASIC

Gene SMN1, Length 1,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-203ENST00000503079 EXTL1Q92935 676 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 NKD1Q969G9 470 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 GLYATL1Q969I3 302 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 SPATA16Q9BXB7 569 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 CARD9Q9H257 536 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 SARS2Q9NP81 518 aaKnown RBP17.29■□□□□ 0.36
SMN1-203ENST00000503079 LCMT1Q9UIC8 334 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 DNPEPQ9ULA0 475 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 DUSP10Q9Y6W6 482 aa17.29■□□□□ 0.36
SMN1-203ENST00000503079 A0A0A6YYK5 440 aaPredicted RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 RGSL1A5PLK6 1076 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 EIF4E1BA6NMX2 242 aaKnown RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 BUD23O43709 281 aaKnown RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 NDST3O95803 873 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 PYGLP06737 847 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 TPM3P06753 285 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 F3P13726 295 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 ITGB6P18564 788 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 CA4P22748 312 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 SLC19A1P41440 591 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 SLC1A1P43005 524 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 WNT3AP56704 352 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 SIRPB2Q5JXA9 342 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 ANKS6Q68DC2 871 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 TIPARPQ7Z3E1 657 aaKnown RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 ZC3H18Q86VM9 953 aaKnown RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 TRAM1L1Q8N609 369 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 TMEM159Q96B96 161 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 ZNF830Q96NB3 372 aaPredicted RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 QKIQ96PU8 341 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMN1-203ENST00000503079 KLC4Q9NSK0 619 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 WDR70Q9NW82 654 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 ZNHIT6Q9NWK9 470 aaKnown RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 SIDT1Q9NXL6 827 aaKnown RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 WDR37Q9Y2I8 494 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 PCDHGA3Q9Y5H0 932 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 PIKFYVEQ9Y2I7 2098 aa17.28■□□□□ 0.36
SMN1-203ENST00000503079 FLNBO75369 2602 aaKnown RBP17.28■□□□□ 0.36
SMN1-203ENST00000503079 A8MU76 341 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 PPP1R12AO14974 1030 aaPredicted RBP17.27■□□□□ 0.36
SMN1-203ENST00000503079 PSTPIP1O43586 416 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 SPOPO43791 374 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 FECHP22830 423 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 UGT1A3P35503 534 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 MAGEA1P43355 309 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 MSLNQ13421 630 aaPredicted RBP17.27■□□□□ 0.36
SMN1-203ENST00000503079 CLPPQ16740 277 aaPredicted RBP17.27■□□□□ 0.36
SMN1-203ENST00000503079 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
SMN1-203ENST00000503079 ZNF569Q5MCW4 686 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 SNAP47Q5SQN1 464 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 CNGA4Q8IV77 575 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 KATNAL2Q8IYT4 538 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 CTRCQ99895 268 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 SLC12A9Q9BXP2 914 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 ADGRE3Q9BY15 652 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 TRIM39Q9HCM9 518 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 IL26Q9NPH9 171 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 DDX56Q9NY93 547 aaKnown RBP17.27■□□□□ 0.36
SMN1-203ENST00000503079 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.36
SMN1-203ENST00000503079 CPNE7Q9UBL6 633 aa17.27■□□□□ 0.36
SMN1-203ENST00000503079 SOWAHDA6NJG2 315 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 EFCAB7A8K855 629 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 UGT1A9O60656 530 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 SLC25A14O95258 325 aaPredicted RBP17.26■□□□□ 0.35
SMN1-203ENST00000503079 UGT1A6P19224 532 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 UGT1A1P22309 533 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 UGT1A4P22310 534 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 CLCNKAP51800 687 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 CTSCP53634 463 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 PPP1CAP62136 330 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 GPLD1P80108 840 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 NFKB2Q00653 900 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 TRA2AQ13595 282 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMN1-203ENST00000503079 CLCA4Q14CN2 919 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 RAD9BQ6WBX8 426 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 FAM83HQ6ZRV2 1179 aaPredicted RBP17.26■□□□□ 0.35
SMN1-203ENST00000503079 SLC25A41Q8N5S1 370 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 CCHCR1Q8TD31 782 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 TFB1MQ8WVM0 346 aaKnown RBP17.26■□□□□ 0.35
SMN1-203ENST00000503079 RTP4Q96DX8 246 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 SGF29Q96ES7 293 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 SLC38A3Q99624 504 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 HEMGNQ9BXL5 484 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 RMI1Q9H9A7 625 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 UGT1A7Q9HAW7 530 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 UGT1A10Q9HAW8 530 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 UGT1A8Q9HAW9 530 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 IL17CQ9P0M4 197 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 DNAJC16Q9Y2G8 782 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 PCDHA13Q9Y5I0 950 aa17.26■□□□□ 0.35
SMN1-203ENST00000503079 UBR5O95071 2799 aaPredicted RBP17.26■□□□□ 0.35
SMN1-203ENST00000503079 MN1Q10571 1320 aaPredicted RBP17.25■□□□□ 0.35
SMN1-203ENST00000503079 OR52A4PA6NMU1 304 aa17.25■□□□□ 0.35
SMN1-203ENST00000503079 LIFP15018 202 aa17.25■□□□□ 0.35
SMN1-203ENST00000503079 PTMSP20962 102 aa17.25■□□□□ 0.35
SMN1-203ENST00000503079 LEPRP48357 1165 aaKnown RBP17.25■□□□□ 0.35
SMN1-203ENST00000503079 SEPT7Q16181 437 aaKnown RBP17.25■□□□□ 0.35
SMN1-203ENST00000503079 TFDP3Q5H9I0 405 aa17.25■□□□□ 0.35
SMN1-203ENST00000503079 C11orf63Q6NUN7 778 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms