RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SEMA3CQ99985 751 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 NXF3Q9H4D5 531 aaKnown RBP17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 ANKHQ9HCJ1 492 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 K7EPI3 171 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 SUV39H1O43463 412 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 SERPIND1P05546 499 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 NUMBP49757 651 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 SULT2A1Q06520 285 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 BICRALQ6AI39 1079 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 NEK5Q6P3R8 708 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 IPCEF1Q8WWN9 437 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 ARL15Q9NXU5 204 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 CNTN3Q9P232 1028 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 RSL1D1O76021 490 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 ALDH2P05091 517 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 CDH5P33151 784 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 GPR15P49685 360 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 MVKQ03426 396 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 CDH18Q13634 790 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 BRMS1LQ5PSV4 323 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 KIAA0930Q6ICG6 404 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 FBXL20Q96IG2 436 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 PANX1Q96RD7 426 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 EMILIN2Q9BXX0 1053 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 MIEF1Q9NQG6 463 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 PTCH2Q9Y6C5 1203 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 RPLP0P05388 317 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 CKMP06732 381 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 OR2B6P58173 313 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 CLEC4DQ8WXI8 215 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 SLC45A3Q96JT2 553 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 GPR22Q99680 433 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 CCDC59Q9P031 241 aaKnown RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 IRF6O14896 467 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 ARF4P18085 180 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 PPP2R1BP30154 601 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 HNF4AP41235 474 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 C1orf220Q5T0J3 134 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 ERICH5Q6P6B1 374 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 SLC39A3Q9BRY0 314 aa17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 UXTQ9UBK9 157 aaPredicted RBP17.1■□□□□ 0.33
HMGXB3-201ENST00000502717 PGLSO95336 258 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ALDOAP04075 364 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 IL18R1Q13478 541 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 CDC73Q6P1J9 531 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 KLRG1Q96E93 195 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 LINGO1Q96FE5 620 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 CHCHD6Q9BRQ6 235 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 SNX7Q9UNH6 387 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 FAM234BA2RU67 622 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 CASTOR2A6NHX0 329 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 NOBOXO60393 691 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 LGALS2P05162 132 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ITIH1P19827 911 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 PPIBP23284 216 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 GPC1P35052 558 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 GNPDA1P46926 289 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 IKBIPQ70UQ0 350 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 TTC29Q8NA56 475 aaPredicted RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 PIK3C3Q8NEB9 887 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 PHF10Q8WUB8 498 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 IRGQQ8WZA9 623 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ATP13A1Q9HD20 1204 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 NEMP2A6NFY4 417 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 TMEM233B4DJY2 109 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 MAGEB3O15480 346 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 NTRK1P04629 796 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 CD36P16671 472 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 CRATP43155 626 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 DGKZQ13574 1117 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 NCBP2-AS2Q69YL0 99 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ZC3HC1Q86WB0 502 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 CAPNS2Q96L46 248 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ZYG11BQ9C0D3 744 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 DYRK1BQ9Y463 629 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 BAZ2AQ9UIF9 1905 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 WARSP23381 471 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 GSK3BP49841 420 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ALDH3A2P51648 485 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 MAXP61244 160 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ANGPT1Q15389 498 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 HID1Q8IV36 788 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 ZC3H7AQ8IWR0 971 aaKnown RBP17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 CRISPLD1Q9H336 500 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 RAB23Q9ULC3 237 aa17.09■□□□□ 0.33
HMGXB3-201ENST00000502717 H0YC42 278 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 ZNF701M0R085 212 aaPredicted RBP17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 SPTLC1O15269 473 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 GJB1P08034 283 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 IST1P53990 364 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 EPHB3P54753 998 aa17.08■□□□□ 0.33
HMGXB3-201ENST00000502717 PCBP1Q15365 356 aaKnown RBP eCLIP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms