RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RNF123Q5XPI4 1314 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC195A0A1B0GUA6 201 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 A0A1W2PR77 199 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 NPEPPSL1A6NEC2 478 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 C17orf100A8MU93 164 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CAPN14A8MX76 684 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 FOXO6A8MYZ6 492 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SOCS6O14544 535 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 RASGRF2O14827 1237 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZC3H11AO75152 810 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 NKX2-2O95096 273 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SCAF4O95104 1147 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 EPN2O95208 641 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 MT-ATP6P00846 226 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SRPRAP08240 638 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 TMEM225BP0DP42 221 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CYP4B1P13584 511 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRLRP16471 622 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CTPS1P17812 591 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 ARF4P18085 180 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 ITIH1P19827 911 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 EDN2P20800 178 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRPH2P23942 346 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 DNASE1P24855 282 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 HOXA13P31271 388 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CXCR5P32302 372 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 IDUAP35475 653 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SOAT1P35610 550 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 MDH1P40925 334 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 FASLGP48023 281 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CD151P48509 253 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 METAP1P53582 386 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 UCP2P55851 309 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 INHBEP58166 350 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CRHR2Q13324 411 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 RAPSNQ13702 412 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 MXD4Q14582 209 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 RRP1BQ14684 758 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CEBPEQ15744 281 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SNAPC1Q16533 368 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 COL28A1Q2UY09 1125 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 MCMDC2Q4G0Z9 681 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 AARDQ4LEZ3 155 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 RBM20Q5T481 1227 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CERCAMQ5T4B2 595 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM91A1Q658Y4 838 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 TMEM198Q66K66 360 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PMS2CLQ68D20 193 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 ANGPTL8Q6UXH0 198 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 NHLRC1Q6VVB1 395 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 MOB3CQ70IA8 216 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 TAOK1Q7L7X3 1001 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 TRAPPC11Q7Z392 1133 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CENPVQ7Z7K6 275 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SGMS1Q86VZ5 419 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC15A3Q8IY34 581 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC13Q8IYE1 715 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 MAML2Q8IZL2 1156 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CLYBLQ8N0X4 340 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SYNE4Q8N205 404 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 GUF1Q8N442 669 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC4A11Q8NBS3 891 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 OR7G3Q8NG95 312 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CFAP61Q8NHU2 1237 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 NSMCE1Q8WV22 266 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 LPGAT1Q92604 370 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 THRSPQ92748 146 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 BCL2L2Q92843 193 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CASP10Q92851 521 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SPACA9Q96E40 222 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 GIMAP5Q96F15 307 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 C5orf30Q96GV9 206 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRR11Q96HE9 360 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SAMD8Q96LT4 415 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 KCNK16Q96T55 309 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 NPAS1Q99742 590 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRRX2Q99811 253 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SEMA3CQ99985 751 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 C17orf80Q9BSJ5 609 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 EDEM2Q9BV94 578 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 KATNB1Q9BVA0 655 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PTDSS2Q9BVG9 487 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SCNM1Q9BWG6 230 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 MOV10L1Q9BXT6 1211 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 GCOM2Q9BZD3 368 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 XYLT2Q9H1B5 865 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 P2RY12Q9H244 342 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC6A13Q9NSD5 602 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PAG1Q9NWQ8 432 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PLK2Q9NYY3 685 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 TFCP2L1Q9NZI6 479 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM30AQ9NZY2 134 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 CWC15Q9P013 229 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 KIAA1456Q9P272 454 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 ABI3Q9P2A4 366 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 TNFSF13BQ9Y275 285 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 USP16Q9Y5T5 823 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 ADCY9O60503 1353 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms