RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 FETUBQ9UGM5 382 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 FNDC3AQ9Y2H6 1198 aaKnown RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SLC22A5O76082 557 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 PTSQ03393 145 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 RAB33AQ14088 237 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 LRIT3Q3SXY7 679 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NAA40Q86UY6 237 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 LAPTM4BQ86VI4 370 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 OR1M1Q8NGA1 313 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CCDC107Q8WV48 283 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 BHLHE41Q9C0J9 482 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SDHAF3Q9NRP4 125 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 MOCS1Q9NZB8 636 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NCKIPSDQ9NZQ3 722 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 HIF3AQ9Y2N7 669 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 EGFRP00533 1210 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 RLN2P04090 185 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 DNAJB2P25686 324 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ELP2Q6IA86 826 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 VN1R5Q7Z5H4 357 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 FBXO39Q8N4B4 442 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TMEM199Q8N511 208 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TANKQ92844 425 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 PBDC1Q9BVG4 233 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 PCDHGB1Q9Y5G3 927 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 A0A1B0GVI7 797 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 A8MUA0 341 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NT5C1B-RDH14C9J2C7 533 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 PLIN3O60664 434 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 FUCA1P04066 466 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TDRPQ86YL5 185 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 FOPNLQ96NB1 174 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CST11Q9H112 138 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 DPAGT1Q9H3H5 408 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NCF1BA6NI72 391 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NCF1CA8MVU1 366 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 QDPRP09417 244 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CYP2C8P10632 490 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 MTHFRP42898 656 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 MRPL19P49406 292 aaKnown RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SLC26A2P50443 739 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 OR2T34Q8NGX1 318 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 OR2T3Q8NH03 318 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SLC13A3Q8WWT9 602 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TREX2Q9BQ50 279 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 WACQ9BTA9 647 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TARS2Q9BW92 718 aaKnown RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 POLR1EQ9GZS1 481 aaKnown RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TOLLIPQ9H0E2 274 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CPQQ9Y646 472 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ZMYM2Q9UBW7 1377 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 PRDX6P30041 224 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 GATMP50440 423 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 RGS1Q08116 209 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 C16orf46Q6P387 395 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ASB18Q6ZVZ8 466 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NT5DC3Q86UY8 548 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ANKLE1Q8NAG6 615 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SPOCK2Q92563 424 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 FUZQ9BT04 418 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ZNF408Q9H9D4 720 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TAS2R7Q9NYW3 318 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NINJ2Q9NZG7 142 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 POMPQ9Y244 141 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ARL5AQ9Y689 179 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 GRIN2DO15399 1336 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ZNF177Q13360 481 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 LAPTM5Q13571 262 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 FAM209AQ5JX71 171 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 DENND1BQ6P3S1 775 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 MTFR2Q6P444 385 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 Q8N9G6 341 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 COLGALT1Q8NBJ5 622 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 OR2AP1Q8NGE2 309 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 HTATIP2Q9BUP3 242 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CCDC167Q9P0B6 97 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ASB4Q9Y574 426 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 LYVE1Q9Y5Y7 322 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 RTTNQ86VV8 2226 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SDR42E2A6NKP2 422 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 DDX39AO00148 427 aaKnown RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SLC34A2O95436 690 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 FHP07954 510 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 OPRL1P41146 370 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ANKRD54Q6NXT1 300 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ZFP3Q96NJ6 502 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ZNF577Q9BSK1 485 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CDCA7Q9BWT1 371 aaPredicted RBP4.75□□□□□ -1.65
NEAT1-202ENST00000501122 LRFN2Q9ULH4 789 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CDK2AP1O14519 115 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CDRT1O95170 752 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CCR9P51686 369 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 INHBCP55103 352 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 CDC42P60953 191 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 TAF13Q15543 124 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 IDNKQ5T6J7 187 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 SLC6A19Q695T7 634 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 ARL6Q9H0F7 186 aa4.75□□□□□ -1.65
NEAT1-202ENST00000501122 NECTIN3Q9NQS3 549 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms