RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 AIMP2Q13155 320 aaKnown RBP4.33□□□□□ -1.72
PTPRK-215ENST00000498284 MYLK3Q32MK0 819 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 NSUN5P2Q63ZY6 315 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 LCN10Q6JVE6 187 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 TRNP1Q6NT89 227 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 C16orf54Q6UWD8 224 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 GFRALQ6UXV0 394 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 BRINP3Q76B58 766 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 TMEM219Q86XT9 240 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 KCNH5Q8NCM2 988 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 THAP6Q8TBB0 222 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 TRPC4APQ8TEL6 797 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 SORCS1Q8WY21 1168 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 PIGTQ969N2 578 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CDCA5Q96FF9 252 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 GAD1Q99259 594 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CENPOQ9BU64 300 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 TMEM39BQ9GZU3 492 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 RETREG1Q9H6L5 497 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 EBF2Q9HAK2 575 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 TMEM5Q9Y2B1 443 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 CMAHPQ9Y471 501 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 LRP12Q9Y561 859 aa4.33□□□□□ -1.72
PTPRK-215ENST00000498284 A0A1W2PQ09 198 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 AGAP14A8MT82 685 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 CDRT15L2A8MXV6 281 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 B4DLN1 442 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 TULP2O00295 520 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 MAP2K7O14733 419 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 SMAD9O15198 467 aaKnown RBP4.32□□□□□ -1.72
PTPRK-215ENST00000498284 TPPPO94811 219 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 HLA-DOBP13765 273 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 MYOD1P15172 320 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 ITGA2P17301 1181 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 USP8P40818 1118 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 GPR143P51810 404 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 GAS1P54826 345 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 NUCB1Q02818 461 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 ACVR2BQ13705 512 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 IRF3Q14653 427 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 CCDC96Q2M329 555 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 MFSD4BQ5TF39 518 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 TUBA1AQ71U36 451 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 ENOSF1Q7L5Y1 443 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 DCP1BQ8IZD4 617 aaKnown RBP4.32□□□□□ -1.72
PTPRK-215ENST00000498284 RASGEF1CQ8N431 466 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 BBS10Q8TAM1 723 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 LNX1Q8TBB1 728 aaPredicted RBP4.32□□□□□ -1.72
PTPRK-215ENST00000498284 DNAAF4Q8WXU2 420 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 JAKMIP2Q96AA8 810 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 NUDCD1Q96RS6 583 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 TUBA1CQ9BQE3 449 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 SRSF8Q9BRL6 282 aaKnown RBP4.32□□□□□ -1.72
PTPRK-215ENST00000498284 MXD3Q9BW11 206 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 CSTL1Q9H114 145 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 LRRC4Q9HBW1 653 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 WWOXQ9NZC7 414 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 RPS6KA6Q9UK32 745 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 NENFQ9UMX5 172 aa4.32□□□□□ -1.72
PTPRK-215ENST00000498284 EME2A4GXA9 379 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-215ENST00000498284 PRAC2D3DTV9 90 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 CDH1P12830 882 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 HOXB6P17509 224 aaKnown RBP4.31□□□□□ -1.72
PTPRK-215ENST00000498284 PON1P27169 355 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 MSH2P43246 934 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 RAD52P43351 418 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 ERVFC1-1P60608 527 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 ISL1P61371 349 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
PTPRK-215ENST00000498284 KRTCAP3Q53RY4 240 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 RARS2Q5T160 578 aaKnown RBP4.31□□□□□ -1.72
PTPRK-215ENST00000498284 TMEM198Q66K66 360 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 CCDC190Q86UF4 302 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 MAP7D3Q8IWC1 876 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.31□□□□□ -1.72
PTPRK-215ENST00000498284 NAGSQ8N159 534 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 TMTC2Q8N394 836 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 SPATA20Q8TB22 786 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 UTP15Q8TED0 518 aaKnown RBP4.31□□□□□ -1.72
PTPRK-215ENST00000498284 SECTM1Q8WVN6 248 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 SLC44A1Q8WWI5 657 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 MOAP1Q96BY2 351 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 SAT2Q96F10 170 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-215ENST00000498284 TTC14Q96N46 770 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 SMC6Q96SB8 1091 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 SEMA3CQ99985 751 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 C1QTNF1Q9BXJ1 281 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 EVA1AQ9H8M9 152 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 POU2F3Q9UKI9 436 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 PROCRQ9UNN8 238 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 OR2W1Q9Y3N9 320 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 PCDHAC2Q9Y5I4 1007 aa4.31□□□□□ -1.72
PTPRK-215ENST00000498284 TMCC2O75069 709 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ACSL1P33121 698 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 IL15P40933 162 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-215ENST00000498284 FUT6P51993 359 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ZNF132P52740 706 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 MRPL12P52815 198 aaKnown RBP4.3□□□□□ -1.72
PTPRK-215ENST00000498284 POU3F1Q03052 451 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ILF3Q12906 894 aaKnown RBP eCLIP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms