RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MAPK9P45984 424 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 UBE2IP63279 158 aaKnown RBP18.31■□□□□ 0.52
PRKCB-209ENST00000498058 MC2RQ01718 297 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 MESDQ14696 234 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 DCAF12Q5T6F0 453 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 ALS2CLQ60I27 953 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 SLC9A4Q6AI14 798 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 ADGRG6Q86SQ4 1221 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 MAP7D3Q8IWC1 876 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 TADA1Q96BN2 335 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 RNF31Q96EP0 1072 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 OR2AG1Q9H205 316 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 CARD9Q9H257 536 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 GEMIN8Q9NWZ8 242 aaKnown RBP18.31■□□□□ 0.52
PRKCB-209ENST00000498058 OGFRQ9NZT2 677 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 KLHL3Q9UH77 587 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 HEY1Q9Y5J3 304 aa18.31■□□□□ 0.52
PRKCB-209ENST00000498058 HEMK1Q9Y5R4 338 aaPredicted RBP18.31■□□□□ 0.52
PRKCB-209ENST00000498058 ZNF106Q9H2Y7 1883 aaKnown RBP18.31■□□□□ 0.52
PRKCB-209ENST00000498058 LOC101059948A0A1B0GTJ6 334 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 RGSL1A5PLK6 1076 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 NKX2-8O15522 239 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 CA4P22748 312 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 MAN1A1P33908 653 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 PPM1FP49593 454 aaPredicted RBP18.3■□□□□ 0.52
PRKCB-209ENST00000498058 KHDC1Q4VXA5 237 aaKnown RBP18.3■□□□□ 0.52
PRKCB-209ENST00000498058 TMC3Q7Z5M5 1100 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 KIAA1328Q86T90 577 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 UNC5BQ8IZJ1 945 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 IMP4Q96G21 291 aaKnown RBP18.3■□□□□ 0.52
PRKCB-209ENST00000498058 PLEKHG4BQ96PX9 1271 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 ASPSCR1Q9BZE9 553 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 ZMYND15Q9H091 742 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 CPNE7Q9UBL6 633 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 IL17BQ9UHF5 180 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 TMPRSS11EQ9UL52 423 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 PCDHA13Q9Y5I0 950 aa18.3■□□□□ 0.52
PRKCB-209ENST00000498058 LRRD1A4D1F6 860 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 PRR19A6NJB7 356 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 AURKAO14965 403 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 CCDC175P0C221 793 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 TMEM253P0C7T8 217 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 GFERP55789 205 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 RAB15P59190 212 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 PLA2G4EQ3MJ16 856 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 ZFYVE27Q5T4F4 411 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 CRTC3Q6UUV7 619 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SLC9B2Q86UD5 537 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SPATA22Q8NHS9 363 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SLC35G2Q8TBE7 412 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 CCHCR1Q8TD31 782 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 AGAP3Q96P47 875 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 OLFM3Q96PB7 478 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 HERPUD2Q9BSE4 406 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SPATA16Q9BXB7 569 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SLC25A18Q9H1K4 315 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 ZFYVE1Q9HBF4 777 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 KLC4Q9NSK0 619 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SIDT1Q9NXL6 827 aaKnown RBP18.29■□□□□ 0.52
PRKCB-209ENST00000498058 ZNF624Q9P2J8 865 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SPO11Q9Y5K1 396 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 SLC30A1Q9Y6M5 507 aa18.29■□□□□ 0.52
PRKCB-209ENST00000498058 CHUKO15111 745 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 MTX2O75431 263 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 SLC25A14O95258 325 aaPredicted RBP18.28■□□□□ 0.52
PRKCB-209ENST00000498058 MT-CYBP00156 380 aaPredicted RBP18.28■□□□□ 0.52
PRKCB-209ENST00000498058 SLC4A1P02730 911 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 SLC19A1P41440 591 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 NOP2P46087 812 aaKnown RBP18.28■□□□□ 0.52
PRKCB-209ENST00000498058 CSRP3P50461 194 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 CLCNKAP51800 687 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 VAV2P52735 878 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 EPHA4P54764 986 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 AP1B1Q10567 949 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 PCSK7Q16549 785 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 BORAQ6PGQ7 559 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 ZNF547Q8IVP9 402 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 ADGRE3Q9BY15 652 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 KCNF1Q9H3M0 494 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 TRIM39Q9HCM9 518 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 FBXO8Q9NRD0 319 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 ZNF711Q9Y462 761 aa18.28■□□□□ 0.52
PRKCB-209ENST00000498058 MN1Q10571 1320 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-209ENST00000498058 KIR2DS5A0A0G2JLQ3 304 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 A0A0G2JNG1 304 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 KIR2DS3K7RE56 304 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 ZSCAN12O43309 604 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 PPFIA2O75334 1257 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 BRAFP15056 766 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 BPIP17213 487 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 CA5AP35218 305 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 POLE2P56282 527 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 DCDC1P59894 354 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 KIR2DS5Q14953 304 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 ZNF569Q5MCW4 686 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 ATG14Q6ZNE5 492 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 NT5DC3Q86UY8 548 aa18.27■□□□□ 0.52
PRKCB-209ENST00000498058 PTRH1Q86Y79 214 aaKnown RBP18.27■□□□□ 0.52
PRKCB-209ENST00000498058 RHOT2Q8IXI1 618 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms