RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NLRP5P59047 1200 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 RPS3AP61247 264 aaKnown RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 CSNK2A1P68400 391 aaPredicted RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 GOLGA8DPQ0D2H9 430 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 CSTF3Q12996 717 aaKnown RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 GRIK2Q13002 908 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 ZBTB17Q13105 803 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 TBCEQ15813 527 aaPredicted RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 ZNF718Q3SXZ3 478 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 ZNF672Q499Z4 452 aaPredicted RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 CXorf66Q5JRM2 361 aaPredicted RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 KCNT1Q5JUK3 1230 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 DUS1LQ6P1R4 473 aaKnown RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 CACNA2D4Q7Z3S7 1137 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 SATL1Q86VE3 508 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 NR2C2APQ86WQ0 139 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 CCDC13Q8IYE1 715 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 ZNF441Q8N8Z8 693 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 POC1AQ8NBT0 407 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 CSNK2A3Q8NEV1 391 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 TDRD7Q8NHU6 1098 aaKnown RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 KCNG4Q8TDN1 519 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 SECTM1Q8WVN6 248 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 SORCS1Q8WY21 1168 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 MMABQ96EY8 250 aaPredicted RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 RRNAD1Q96FB5 475 aaKnown RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 PLEKHF1Q96S99 279 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 PKP4Q99569 1192 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 PCGF1Q9BSM1 259 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 SPRY4Q9C004 299 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 EVA1AQ9H8M9 152 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 SCPEP1Q9HB40 452 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 FBRSL1Q9HCM7 1045 aaKnown RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 LTB4R2Q9NPC1 389 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 ZNF69Q9UC07 566 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 LIMA1Q9UHB6 759 aaKnown RBP2.84□□□□□ -1.95
RIF1-212ENST00000498041 ZNF112Q9UJU3 913 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 KCNS2Q9ULS6 477 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 ICAM5Q9UMF0 924 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 KNSTRNQ9Y448 316 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 LOXL2Q9Y4K0 774 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 PCDHAC2Q9Y5I4 1007 aa2.84□□□□□ -1.95
RIF1-212ENST00000498041 CGNL1Q0VF96 1302 aa2.84□□□□□ -1.96
RIF1-212ENST00000498041 PPIP5K1Q6PFW1 1433 aa2.84□□□□□ -1.96
RIF1-212ENST00000498041 MON2Q7Z3U7 1717 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 XRN1Q8IZH2 1706 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 SPINT2O43291 252 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 SLC25A12O75746 678 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 MBD4O95243 580 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 IPO7O95373 1038 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 TBX18O95935 607 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 EGFP01133 1207 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 S1PR1P21453 382 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 HOXC9P31274 260 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 PBX3P40426 434 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 IL15P40933 162 aaPredicted RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 TMPOP42166 694 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 FASLGP48023 281 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 F2RL1P55085 397 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 PDE1BQ01064 536 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 FOXM1Q08050 763 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 SLC20A2Q08357 652 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 TROAPQ12815 778 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 ILF3Q12906 894 aaKnown RBP eCLIP2.83□□□□□ -1.962e-9■■■□□ 17.4
RIF1-212ENST00000498041 FRG2Q64ET8 278 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 TRNP1Q6NT89 227 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 DSTYKQ6XUX3 929 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 TMTC3Q6ZXV5 915 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 DPPA4Q7L190 304 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 MCM10Q7L590 875 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 ZNF34Q8IZ26 560 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 RNF113BQ8IZP6 322 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 PCDH20Q8N6Y1 951 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 TMEM116Q8NCL8 245 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 OR2AK2Q8NG84 335 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 OR14L1PQ8NHC6 308 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 SPATA20Q8TB22 786 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 LNX1Q8TBB1 728 aaPredicted RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 IGSF8Q969P0 613 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 ORAI1Q96D31 301 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 CDCA5Q96FF9 252 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 MPP4Q96JB8 637 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 PPP1R13BQ96KQ4 1090 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 ACOX2Q99424 681 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 MTERF1Q99551 399 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 CMKLR1Q99788 373 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 SLC28A3Q9HAS3 691 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 ACSS1Q9NUB1 689 aaPredicted RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 TMEM30AQ9NV96 361 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 EHD2Q9NZN4 543 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 CNOT8Q9UFF9 292 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 POU2F3Q9UKI9 436 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 PADI1Q9ULC6 663 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 AMDHD2Q9Y303 409 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 LAS1LQ9Y4W2 734 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 PSAT1Q9Y617 370 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 KCNE2Q9Y6J6 123 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 MAU2Q9Y6X3 613 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 PDS5AQ29RF7 1337 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms