RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TRIM61Q5EBN2 209 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 KIAA0930Q6ICG6 404 aaPredicted RBP19.86■□□□□ 0.77
CTSD-206ENST00000497544 SLC23A3Q6PIS1 610 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 AFTPHQ6ULP2 937 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 ENPP7Q6UWV6 458 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 LAYNQ6UX15 382 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 TAS2R42Q7RTR8 314 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 IGDCC3Q8IVU1 814 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 PALM2Q8IXS6 379 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 FBXO36Q8NEA4 188 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 OR4L1Q8NH43 312 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 GLYATL1Q969I3 302 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.86■□□□□ 0.77
CTSD-206ENST00000497544 ULK4Q96C45 1275 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 CFAP36Q96G28 342 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 FCRL3Q96P31 734 aaPredicted RBP19.86■□□□□ 0.77
CTSD-206ENST00000497544 FMO2Q99518 471 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 TRIM56Q9BRZ2 755 aaKnown RBP19.86■□□□□ 0.77
CTSD-206ENST00000497544 LGR4Q9BXB1 951 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 NUSAP1Q9BXS6 441 aaKnown RBP19.86■□□□□ 0.77
CTSD-206ENST00000497544 PHACTR1Q9C0D0 580 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 CNOT6Q9ULM6 557 aaKnown RBP19.86■□□□□ 0.77
CTSD-206ENST00000497544 NFU1Q9UMS0 254 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 ANKRD6Q9Y2G4 727 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 GPSM3Q9Y4H4 160 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 FAM169AQ9Y6X4 670 aa19.86■□□□□ 0.77
CTSD-206ENST00000497544 OR51F1A6NGY5 319 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 PATE3B3GLJ2 98 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 MYCLP1P12525 358 aaPredicted RBP19.85■□□□□ 0.77
CTSD-206ENST00000497544 KIAA1024LP59773 190 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 NFATC4Q14934 902 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 FASTKD1Q53R41 847 aaKnown RBP19.85■□□□□ 0.77
CTSD-206ENST00000497544 SPANXN3Q5MJ09 141 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 PHYKPLQ8IUZ5 450 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.85■□□□□ 0.77
CTSD-206ENST00000497544 SGSM3Q96HU1 749 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 VPS35Q96QK1 796 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 TTC1Q99614 292 aa19.85■□□□□ 0.77
CTSD-206ENST00000497544 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.85■□□□□ 0.771e-7■□□□□ 9.6
CTSD-206ENST00000497544 V9GYY5 206 aaPredicted RBP19.85■□□□□ 0.77
CTSD-206ENST00000497544 TDRD6O60522 2096 aaKnown RBP19.85■□□□□ 0.77
CTSD-206ENST00000497544 ZNF106Q9H2Y7 1883 aaKnown RBP19.84■□□□□ 0.77
CTSD-206ENST00000497544 SYPP08247 313 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 MAGEA4P43358 317 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 IRX4P78413 519 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 THOC5Q13769 683 aaKnown RBP19.84■□□□□ 0.77
CTSD-206ENST00000497544 FASTKD3Q14CZ7 662 aaKnown RBP19.84■□□□□ 0.77
CTSD-206ENST00000497544 LONRF1Q17RB8 773 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 LDLRAP1Q5SW96 308 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 TCEAL6Q6IPX3 200 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 TCEAL3Q969E4 200 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 WDR92Q96MX6 357 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 TTC25Q96NG3 672 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 ANKZF1Q9H8Y5 726 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 TRIM39Q9HCM9 518 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 CATSPERZQ9NTU4 200 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 C20orf96Q9NUD7 363 aaPredicted RBP19.84■□□□□ 0.77
CTSD-206ENST00000497544 MOSPD1Q9UJG1 213 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 CACNA1EQ15878 2313 aa19.84■□□□□ 0.77
CTSD-206ENST00000497544 SPTY2D1-AS1A0A0U1RR47 76 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 ZCWPW2A0A1B0GU75 182 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 FOXN2P32314 431 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 PPARGP37231 505 aaPredicted RBP19.83■□□□□ 0.77
CTSD-206ENST00000497544 CDKN1CP49918 316 aaPredicted RBP19.83■□□□□ 0.77
CTSD-206ENST00000497544 NXPH1P58417 271 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 CRYMQ14894 314 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 ERCC6LQ2NKX8 1250 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 KIF19Q2TAC6 998 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 DOK6Q6PKX4 331 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 MACC1Q6ZN28 852 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 UNC5AQ6ZN44 842 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 SDCCAG8Q86SQ7 713 aaPredicted RBP19.83■□□□□ 0.77
CTSD-206ENST00000497544 TRIM74Q86UV6 250 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 SPATS2Q86XZ4 545 aaKnown RBP19.83■□□□□ 0.77
CTSD-206ENST00000497544 SLC22A18ASQ8N1D0 253 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 OTUD6BQ8N6M0 293 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 EIF1ADQ8N9N8 165 aaKnown RBP19.83■□□□□ 0.77
CTSD-206ENST00000497544 COX14Q96I36 57 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 CAPN10Q9HC96 672 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 ARFGAP3Q9NP61 516 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 GPR27Q9NS67 375 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 SMOXQ9NWM0 555 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 TMPRSS11EQ9UL52 423 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 TMEM98Q9Y2Y6 226 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 SNX11Q9Y5W9 270 aa19.83■□□□□ 0.77
CTSD-206ENST00000497544 ADAMTS9Q9P2N4 1935 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 TMEM202A6NGA9 273 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 AGAP14A8MT82 685 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 CD3EAPO15446 510 aaKnown RBP19.82■□□□□ 0.76
CTSD-206ENST00000497544 GPR39O43194 453 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 ECHS1P30084 290 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 ARCN1P48444 511 aaKnown RBP19.82■□□□□ 0.76
CTSD-206ENST00000497544 GPRC6AQ5T6X5 926 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 LYPLAL1Q5VWZ2 237 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 MRNIPQ6NTE8 343 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 IL27RAQ6UWB1 636 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 CERS6Q6ZMG9 384 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 SERPINA9Q86WD7 417 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 NXPE1Q8N323 547 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 OR56A4Q8NGH8 313 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms