RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 LDLRAD4O15165 306 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 NCAM2O15394 837 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 CTCFP49711 727 aaPredicted RBP5.16□□□□□ -1.58
MDM2-220ENST00000496959 ISL1P61371 349 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 FRG2Q64ET8 278 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 TTI2Q6NXR4 508 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 FBXL22Q6P050 247 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 ASB18Q6ZVZ8 466 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 GSTA5Q7RTV2 222 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 KLHDC8BQ8IXV7 354 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 CPXCR1Q8N123 301 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 PCDH20Q8N6Y1 951 aaKnown RBP5.16□□□□□ -1.58
MDM2-220ENST00000496959 SLC24A4Q8NFF2 622 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 GRAPLQ8TC17 118 aaPredicted RBP5.16□□□□□ -1.58
MDM2-220ENST00000496959 HTRA1Q92743 480 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 LRRC59Q96AG4 307 aaKnown RBP5.16□□□□□ -1.58
MDM2-220ENST00000496959 ZNF583Q96ND8 569 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 TMEM47Q9BQJ4 181 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 BRF2Q9HAW0 419 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 ASAH2Q9NR71 780 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 SLC6A13Q9NSD5 602 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 FAM118AQ9NWS6 357 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 OR2W1Q9Y3N9 320 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 NALCNQ8IZF0 1738 aa5.16□□□□□ -1.58
MDM2-220ENST00000496959 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.16□□□□□ -1.58
MDM2-220ENST00000496959 PTCH1Q13635 1447 aa5.15□□□□□ -1.58
MDM2-220ENST00000496959 ADAMTS13Q76LX8 1427 aa5.15□□□□□ -1.58
MDM2-220ENST00000496959 ADGRL3Q9HAR2 1447 aa5.15□□□□□ -1.58
MDM2-220ENST00000496959 SPINT2O43291 252 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 SEC31AO94979 1220 aaKnown RBP5.15□□□□□ -1.59
MDM2-220ENST00000496959 PAK4O96013 591 aaPredicted RBP5.15□□□□□ -1.59
MDM2-220ENST00000496959 EGFP01133 1207 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 CFC1BP0CG36 223 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 CFC1P0CG37 223 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 FASLGP48023 281 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 HOXA1P49639 335 aaPredicted RBP5.15□□□□□ -1.59
MDM2-220ENST00000496959 PTP4A2Q12974 167 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 FGFBP1Q14512 234 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 DHX8Q14562 1220 aaKnown RBP5.15□□□□□ -1.59
MDM2-220ENST00000496959 CCDC96Q2M329 555 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 PRICKLE4Q2TBC4 344 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 COL28A1Q2UY09 1125 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 TMEM35AQ53FP2 167 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 BRAT1Q6PJG6 821 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 ZNF852Q6ZMS4 543 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 CACNA2D4Q7Z3S7 1137 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 NFKBIDQ8NI38 313 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 NEURL2Q9BR09 285 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 HAO1Q9UJM8 370 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 SLC13A4Q9UKG4 626 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 CYP46A1Q9Y6A2 500 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 AFF2P51816 1311 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 COL22A1Q8NFW1 1626 aaPredicted RBP5.15□□□□□ -1.59
MDM2-220ENST00000496959 ROCK1Q13464 1354 aa5.15□□□□□ -1.59
MDM2-220ENST00000496959 RGS12O14924 1447 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 SNAP23O00161 211 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 TIMP3P35625 211 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 EIF3BP55884 814 aaKnown RBP5.14□□□□□ -1.59
MDM2-220ENST00000496959 GRIK2Q13002 908 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 ZNF234Q14588 700 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 STXBP5Q5T5C0 1151 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 SLC9C2Q5TAH2 1124 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.14□□□□□ -1.59
MDM2-220ENST00000496959 BRINP3Q76B58 766 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 EPHX4Q8IUS5 362 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 TMEM255BQ8WV15 326 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 ST8SIA4Q92187 359 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 HARBI1Q96MB7 349 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 PCGF1Q9BSM1 259 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 POLR3CQ9BUI4 534 aaPredicted RBP5.14□□□□□ -1.59
MDM2-220ENST00000496959 FAF1Q9UNN5 650 aaPredicted RBP5.14□□□□□ -1.59
MDM2-220ENST00000496959 DLGAP4Q9Y2H0 992 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 NRXN3Q9Y4C0 1643 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 PTPRCP08575 1304 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 PRAG1Q86YV5 1406 aa5.14□□□□□ -1.59
MDM2-220ENST00000496959 LRP5O75197 1615 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 VCYO14598 125 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 ZNHIT1O43257 154 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 F9P00740 461 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 GM2AP17900 193 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 POLR2CP19387 275 aaPredicted RBP5.13□□□□□ -1.59
MDM2-220ENST00000496959 MMP14P50281 582 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 DCST1Q5T197 706 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 CCNYL2Q5T2Q4 361 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 MYRIPQ8NFW9 859 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 THAP6Q8TBB0 222 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 GTF3C6Q969F1 213 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 ALG14Q96F25 216 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 WBP1Q96G27 269 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 GRAMD2BQ96HH9 432 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 PCYT2Q99447 389 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 EIF2AK1Q9BQI3 630 aaKnown RBP5.13□□□□□ -1.59
MDM2-220ENST00000496959 SLC25A18Q9H1K4 315 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 RANBP17Q9H2T7 1088 aaKnown RBP5.13□□□□□ -1.59
MDM2-220ENST00000496959 KIF9Q9HAQ2 790 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 ACSS1Q9NUB1 689 aaPredicted RBP5.13□□□□□ -1.59
MDM2-220ENST00000496959 LRRFIP2Q9Y608 721 aaKnown RBP5.13□□□□□ -1.59
MDM2-220ENST00000496959 PNPLA6Q8IY17 1366 aa5.13□□□□□ -1.59
MDM2-220ENST00000496959 KIF1AQ12756 1690 aa5.12□□□□□ -1.59
MDM2-220ENST00000496959 TNFSF14O43557 240 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms