RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PPP2R5EQ16537 467 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 PLA2G4EQ3MJ16 856 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 SIRPB2Q5JXA9 342 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 TMEM71Q6P5X7 295 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 DTX1Q86Y01 620 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 PHYKPLQ8IUZ5 450 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 CCDC50Q8IVM0 306 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 ZNF547Q8IVP9 402 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 SLC38A3Q99624 504 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 GORASP1Q9BQQ3 440 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 SEMA4CQ9C0C4 833 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 TRIM39Q9HCM9 518 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 BPIFA1Q9NP55 256 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 SARS2Q9NP81 518 aaKnown RBP14.1□□□□□ -0.15
VTI1A-209ENST00000496445 PRDM8Q9NQV8 689 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 RAD18Q9NS91 495 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 SCHIP1Q9P0W5 487 aaPredicted RBP14.1□□□□□ -0.15
VTI1A-209ENST00000496445 KLHL8Q9P2G9 620 aaPredicted RBP14.1□□□□□ -0.15
VTI1A-209ENST00000496445 SLC23A2Q9UGH3 650 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 FAM153AQ9UHL3 310 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 REXO2Q9Y3B8 237 aaKnown RBP14.1□□□□□ -0.15
VTI1A-209ENST00000496445 COL6A6A6NMZ7 2263 aa14.1□□□□□ -0.15
VTI1A-209ENST00000496445 PRR19A6NJB7 356 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 DUX1O43812 170 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 SNX2O60749 519 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 ZRANB2O95218 330 aaKnown RBP eCLIP14.09□□□□□ -0.15
VTI1A-209ENST00000496445 FGF3P11487 239 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-209ENST00000496445 CYLC1P35663 651 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-209ENST00000496445 CLCNKAP51800 687 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 UBE2IP63279 158 aaKnown RBP14.09□□□□□ -0.15
VTI1A-209ENST00000496445 TAF1BQ53T94 588 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-209ENST00000496445 CRTC3Q6UUV7 619 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 BBS12Q6ZW61 710 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 VASH2Q86V25 355 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 RCOR2Q8IZ40 523 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 ZNF843Q8N446 348 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 HTR3CQ8WXA8 447 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 P3H4Q92791 437 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 WBP1Q96G27 269 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 RBM41Q96IZ5 413 aaKnown RBP14.09□□□□□ -0.15
VTI1A-209ENST00000496445 PLEKHG4BQ96PX9 1271 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 FCRL5Q96RD9 977 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 DPYSL5Q9BPU6 564 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 HEMGNQ9BXL5 484 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 B3GNT4Q9C0J1 378 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 C10orf88Q9H8K7 445 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 KLC4Q9NSK0 619 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 WDR70Q9NW82 654 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 OCIAD1Q9NX40 245 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 PDP2Q9P2J9 529 aa14.09□□□□□ -0.15
VTI1A-209ENST00000496445 KIR2DS5A0A0G2JLQ3 304 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 A0A0G2JNG1 304 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 HACD1B0YJ81 288 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 GPR89AB7ZAQ6 455 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-209ENST00000496445 APOC4-APOC2K7ER74 178 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 KIR2DS3K7RE56 304 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 GPR39O43194 453 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 MTSS1O43312 755 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 NDUFA10O95299 355 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 APOC2P02655 101 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 GPR89BP0CG08 455 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 WT1P19544 449 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-209ENST00000496445 CD82P27701 267 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 CA5AP35218 305 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 CTNNA1P35221 906 aaKnown RBP14.08□□□□□ -0.16
VTI1A-209ENST00000496445 HMGCLP35914 325 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 C19orf57Q0VDD7 668 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 LY6DQ14210 128 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 KIR2DS5Q14953 304 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 SPA17Q15506 151 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 SLC1A5Q15758 541 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 ATP13A5Q4VNC0 1218 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 DAAM2Q86T65 1068 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 SLC9B2Q86UD5 537 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 SLC25A41Q8N5S1 370 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 BMPERQ8N8U9 685 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 AGBL5Q8NDL9 886 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 OR10G6Q8NH81 332 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 AHCYL2Q96HN2 611 aaKnown RBP14.08□□□□□ -0.16
VTI1A-209ENST00000496445 MRFAP1L1Q96HT8 127 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 VPS35Q96QK1 796 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 PANX2Q96RD6 677 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 TBC1D10AQ9BXI6 508 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 ZMYND15Q9H091 742 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 RBSNQ9H1K0 784 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 AKAP7Q9P0M2 348 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-209ENST00000496445 CPNE7Q9UBL6 633 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 PCDHGA3Q9Y5H0 932 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 DUSP10Q9Y6W6 482 aa14.08□□□□□ -0.16
VTI1A-209ENST00000496445 GAPDHSO14556 408 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-209ENST00000496445 EPOP01588 193 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 SLC2A4P14672 509 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 ZNF7P17097 686 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-209ENST00000496445 RBL1P28749 1068 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 EPHA4P54764 986 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 INSCQ1MX18 579 aa14.07□□□□□ -0.16
VTI1A-209ENST00000496445 CCDC70Q6NSX1 233 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms