RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TRIM54Q9BYV2 358 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 NARFLQ9H6Q4 476 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 EML4Q9HC35 981 aaKnown RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 KMT5AQ9NQR1 393 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PDGFCQ9NRA1 345 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 IARS2Q9NSE4 1012 aaKnown RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 ANKEF1Q9NU02 776 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FBXL12Q9NXK8 326 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 OPTCQ9UBM4 332 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 RAPGEFL1Q9UHV5 662 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 STOML2Q9UJZ1 356 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TPRKBQ9Y3C4 175 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PEX16Q9Y5Y5 336 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 A0A0G2JMP0 313 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 SNX2O60749 519 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 SEMA3DO95025 777 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 OXTRP30559 389 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 CD68P34810 354 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 TALDO1P37837 337 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 VBP1P61758 197 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 CACNB2Q08289 660 aaPredicted RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 PIK3R6Q5UE93 754 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TIGD3Q6B0B8 471 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 LETMD1Q6P1Q0 360 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PRR23BQ6ZRT6 265 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ARMCX2Q7L311 632 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 GATAD2AQ86YP4 633 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 C4orf19Q8IY42 314 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ANKRD53Q8N9V6 530 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 OR10Z1Q8NGY1 313 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 FAM110BQ8TC76 370 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 ELMO3Q96BJ8 720 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TMEM80Q96HE8 168 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TBCBQ99426 244 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TINF2Q9BSI4 451 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 DPEP3Q9H4B8 488 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TASP1Q9H6P5 420 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 CCNB1IP1Q9NPC3 277 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 INTS6Q9UL03 887 aaKnown RBP9.01□□□□□ -0.97
HPS4-217ENST00000496385 CFL2Q9Y281 166 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 TRAPPC4Q9Y296 219 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 BTBD3Q9Y2F9 522 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 RWDD3Q9Y3V2 267 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PCDHGB2Q9Y5G2 931 aa9.01□□□□□ -0.97
HPS4-217ENST00000496385 PLK4O00444 970 aa9□□□□□ -0.97
HPS4-217ENST00000496385 ZNF780AO75290 641 aaPredicted RBP9□□□□□ -0.97
HPS4-217ENST00000496385 SNAI1O95863 264 aaPredicted RBP9□□□□□ -0.97
HPS4-217ENST00000496385 JUNDP17535 347 aa9□□□□□ -0.97
HPS4-217ENST00000496385 LIG4P49917 911 aa9□□□□□ -0.97
HPS4-217ENST00000496385 SERPINH1P50454 418 aaKnown RBP9□□□□□ -0.97
HPS4-217ENST00000496385 KPNA2P52292 529 aaKnown RBP9□□□□□ -0.97
HPS4-217ENST00000496385 ZNF143P52747 638 aaPredicted RBP9□□□□□ -0.97
HPS4-217ENST00000496385 EEFSECP57772 596 aaKnown RBP9□□□□□ -0.97
HPS4-217ENST00000496385 SEMA3BQ13214 749 aa9□□□□□ -0.97
HPS4-217ENST00000496385 IKZF1Q13422 519 aa9□□□□□ -0.97
HPS4-217ENST00000496385 PRPSAP1Q14558 356 aa9□□□□□ -0.97
HPS4-217ENST00000496385 PARP15Q460N3 678 aa9□□□□□ -0.97
HPS4-217ENST00000496385 NIPA1Q7RTP0 329 aa9□□□□□ -0.97
HPS4-217ENST00000496385 STRA8Q7Z7C7 330 aa9□□□□□ -0.97
HPS4-217ENST00000496385 TMEM199Q8N511 208 aa9□□□□□ -0.97
HPS4-217ENST00000496385 CELF2-AS1Q8N7Q2 184 aa9□□□□□ -0.97
HPS4-217ENST00000496385 TRPV1Q8NER1 839 aa9□□□□□ -0.97
HPS4-217ENST00000496385 CCDC126Q96EE4 140 aa9□□□□□ -0.97
HPS4-217ENST00000496385 PHOX2BQ99453 314 aa9□□□□□ -0.97
HPS4-217ENST00000496385 ZNF670Q9BS34 389 aa9□□□□□ -0.97
HPS4-217ENST00000496385 NUAK2Q9H093 628 aa9□□□□□ -0.97
HPS4-217ENST00000496385 SOX17Q9H6I2 414 aaPredicted RBP9□□□□□ -0.97
HPS4-217ENST00000496385 CHRAC1Q9NRG0 131 aa9□□□□□ -0.97
HPS4-217ENST00000496385 TAS2R9Q9NYW1 312 aa9□□□□□ -0.97
HPS4-217ENST00000496385 CCDC59Q9P031 241 aaKnown RBP9□□□□□ -0.97
HPS4-217ENST00000496385 STYXL1Q9Y6J8 313 aa9□□□□□ -0.97
HPS4-217ENST00000496385 ZBBXA8MT70 800 aa9□□□□□ -0.97
HPS4-217ENST00000496385 HACD1B0YJ81 288 aa9□□□□□ -0.97
HPS4-217ENST00000496385 TK2O00142 265 aa9□□□□□ -0.97
HPS4-217ENST00000496385 CTDSP2O14595 271 aa9□□□□□ -0.97
HPS4-217ENST00000496385 INPP4BO15327 924 aa9□□□□□ -0.97
HPS4-217ENST00000496385 OR7A10O76100 309 aa9□□□□□ -0.97
HPS4-217ENST00000496385 ATG7O95352 703 aa9□□□□□ -0.97
HPS4-217ENST00000496385 GNRH1P01148 92 aa9□□□□□ -0.97
HPS4-217ENST00000496385 SBK3P0C264 359 aa9□□□□□ -0.97
HPS4-217ENST00000496385 IL7RP16871 459 aa9□□□□□ -0.97
HPS4-217ENST00000496385 IL12RB1P42701 662 aa9□□□□□ -0.97
HPS4-217ENST00000496385 HCAR3P49019 387 aa9□□□□□ -0.97
HPS4-217ENST00000496385 CD47Q08722 323 aa9□□□□□ -0.97
HPS4-217ENST00000496385 BAMBIQ13145 260 aa9□□□□□ -0.97
HPS4-217ENST00000496385 RFX4Q33E94 735 aa9□□□□□ -0.97
HPS4-217ENST00000496385 ZC3H12BQ5HYM0 836 aaKnown RBP9□□□□□ -0.97
HPS4-217ENST00000496385 TPRG1LQ5T0D9 272 aa9□□□□□ -0.97
HPS4-217ENST00000496385 LYPD8Q6UX82 237 aa9□□□□□ -0.97
HPS4-217ENST00000496385 RIMKLAQ8IXN7 391 aa9□□□□□ -0.97
HPS4-217ENST00000496385 CLEC4FQ8N1N0 589 aa9□□□□□ -0.97
HPS4-217ENST00000496385 SVOPLQ8N434 492 aa9□□□□□ -0.97
HPS4-217ENST00000496385 PARP16Q8N5Y8 322 aa9□□□□□ -0.97
HPS4-217ENST00000496385 GTF2H4Q92759 462 aa9□□□□□ -0.97
HPS4-217ENST00000496385 MCRS1Q96EZ8 462 aa9□□□□□ -0.97
HPS4-217ENST00000496385 CGRRF1Q99675 332 aa9□□□□□ -0.97
HPS4-217ENST00000496385 SLC30A3Q99726 388 aa9□□□□□ -0.97
HPS4-217ENST00000496385 C1QTNF1Q9BXJ1 281 aa9□□□□□ -0.97
HPS4-217ENST00000496385 DHX35Q9H5Z1 703 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms