RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 HDAC3O15379 428 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 RASSF9O75901 435 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 NQO1P15559 274 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 IL2P60568 153 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 HERVK_113P63132 956 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 GRM2Q14416 872 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 ZNF805Q5CZA5 627 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 FRMD7Q6ZUT3 714 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 HSD11B1LQ7Z5J1 315 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 STAG3L4Q8TBR4 150 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 LINGO1Q96FE5 620 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 NSL1Q96IY1 281 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 PLEKHG4BQ96PX9 1271 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 OSBPL1AQ9BXW6 950 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 DKK3Q9UBP4 350 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 SARDHQ9UL12 918 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 NUP210Q8TEM1 1887 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 LRRC14BA6NHZ5 514 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 UPK3BL1B0FP48 263 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 UPK3BL2E5RIL1 263 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 SMIM24O75264 130 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 ECI2O75521 394 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 SIX3O95343 332 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 HLA-EP13747 358 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 VIPR1P32241 457 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 PPARGP37231 505 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 OPRD1P41143 372 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 HK2P52789 917 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 METAP1P53582 386 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 ST8SIA6P61647 398 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 DLX2Q07687 328 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 PFKFB4Q16877 469 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 C9orf64Q5T6V5 341 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 FAM219BQ5XKK7 198 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 FBXW10Q5XX13 1052 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 SEL1L3Q68CR1 1132 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 PTRHD1Q6GMV3 140 aaKnown RBP13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 MACC1Q6ZN28 852 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 LRIG1Q96JA1 1093 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 OR52B2Q96RD2 323 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 TTC1Q99614 292 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 ABCG8Q9H221 673 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 S1PR5Q9H228 398 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 WDR55Q9H6Y2 383 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 LNPEPQ9UIQ6 1025 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 C16orf96A6NNT2 1141 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 PRR5-ARHGAP8B1AHC4 643 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 BTN3A1O00481 513 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 KRT16P08779 473 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 ITGB6P18564 788 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 ARHGAP8P85298 464 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 B4GALNT1Q00973 533 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 RALGDSQ12967 914 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 ADAM15Q13444 863 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 SH2D4BQ5SQS7 431 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 CUZD1Q86UP6 607 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 UTP4Q969X6 686 aaKnown RBP13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 PPP1R36Q96LQ0 422 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 KXD1Q9BQD3 176 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 NUF2Q9BZD4 464 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 GNPTGQ9UJJ9 305 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 HCN2Q9UL51 889 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 RNF112Q9ULX5 631 aa13.54□□□□□ -0.24
SPTBN1-205ENST00000496323 SUPT7LO94864 414 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 ZNF30P17039 623 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 TSPAN8P19075 237 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 GJA4P35212 333 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 HK3P52790 923 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 GALNT1Q10472 559 aaPredicted RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 RUNX3Q13761 415 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 ARHGEF7Q14155 803 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 EIF4HQ15056 248 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 HNRNPA1L2Q32P51 320 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 FNDC3BQ53EP0 1204 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 ATAT1Q5SQI0 421 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 ZDHHC20Q5W0Z9 365 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 UGT3A1Q6NUS8 523 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 PARM1Q6UWI2 310 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 PARS2Q7L3T8 475 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 TERB1Q8NA31 727 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 HCAR2Q8TDS4 363 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 INPP5DQ92835 1189 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 SCAMP4Q969E2 229 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 RPP25Q9BUL9 199 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 ZDHHC3Q9NYG2 299 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 VTI1BQ9UEU0 232 aa13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 MBD1Q9UIS9 605 aaPredicted RBP13.53□□□□□ -0.24
SPTBN1-205ENST00000496323 IGLV3-16A0A075B6K0 115 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 SUPT3HB4E1H0 165 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.24
SPTBN1-205ENST00000496323 SLCO1B7G3V0H7 640 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms