RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 UGT1A1P22309 533 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 UGT1A4P22310 534 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 RBL1P28749 1068 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 CSF2RBP32927 897 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 CSTF2P33240 577 aaKnown RBP eCLIP9.48□□□□□ -0.89
MSH5-218ENST00000494646 UGT1A3P35503 534 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 ATP5OP48047 213 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 ZNF75DP51815 510 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 HADHBP55084 474 aaKnown RBP9.48□□□□□ -0.89
MSH5-218ENST00000494646 WNT3AP56704 352 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 RHDQ02161 417 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 HHEXQ03014 270 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 LRP8Q14114 963 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 TFDP3Q5H9I0 405 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 SIRPB2Q5JXA9 342 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 ZNF569Q5MCW4 686 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 MANEAQ5SRI9 462 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.48□□□□□ -0.89
MSH5-218ENST00000494646 TMEM164Q5U3C3 297 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 TMEM71Q6P5X7 295 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 CRTC3Q6UUV7 619 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 KDELC1Q6UW63 502 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 SLC9B2Q86UD5 537 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 VASH2Q86V25 355 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 CCDC170Q8IYT3 715 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 KATNAL2Q8IYT4 538 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 GDAP1Q8TB36 358 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 HTR3CQ8WXA8 447 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 GLYATL1Q969I3 302 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 PMEPA1Q969W9 287 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 MRGPRX2Q96LB1 330 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 TAAR9Q96RI9 348 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 HERPUD2Q9BSE4 406 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 ZSCAN5AQ9BUG6 496 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 SEMA4CQ9C0C4 833 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 CARD9Q9H257 536 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 OSGEPL1Q9H4B0 414 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 RMI1Q9H9A7 625 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 UGT1A7Q9HAW7 530 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 UGT1A10Q9HAW8 530 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 UGT1A8Q9HAW9 530 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 SCHIP1Q9P0W5 487 aaPredicted RBP9.48□□□□□ -0.89
MSH5-218ENST00000494646 TRIM10Q9UDY6 481 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 KLHL3Q9UH77 587 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 TMPRSS11EQ9UL52 423 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 DNAJC16Q9Y2G8 782 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 PCDHB11Q9Y5F2 797 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 EFCAB7A8K855 629 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 TK2O00142 265 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 CDK14O94921 469 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 NDUFA10O95299 355 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 AGTP01019 485 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 F3P13726 295 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 TYRP1P17643 537 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 RPL10P27635 214 aaKnown RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 CA5AP35218 305 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 FASLGP48023 281 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 ARSDP51689 593 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 GPLD1P80108 840 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 TMEM115Q12893 351 aaPredicted RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 PTPRCAPQ14761 206 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 SEPT7Q16181 437 aaKnown RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 INSCQ1MX18 579 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 ATP13A5Q4VNC0 1218 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 KHDC1Q4VXA5 237 aaKnown RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 CCDC181Q5TID7 509 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 AADACL2Q6P093 401 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 FAM129CQ86XR2 697 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 ZNF843Q8N446 348 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 LSM14AQ8ND56 463 aaKnown RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 IPMKQ8NFU5 416 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 OR4D9Q8NGE8 314 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 OR10G6Q8NH81 332 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 BLOC1S5Q8TDH9 187 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 TTC9Q92623 222 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 ART4Q93070 314 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 RNF31Q96EP0 1072 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 OXNAD1Q96HP4 312 aaPredicted RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 RBM41Q96IZ5 413 aaKnown RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 PLEKHG4BQ96PX9 1271 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 FCRL5Q96RD9 977 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 CTRCQ99895 268 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 FAM118BQ9BPY3 351 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 STN1Q9H668 368 aaKnown RBP9.47□□□□□ -0.89
MSH5-218ENST00000494646 RAD18Q9NS91 495 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 SLC39A1Q9NY26 324 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 CPNE7Q9UBL6 633 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.47□□□□□ -0.89
MSH5-218ENST00000494646 B3GALT1Q9Y5Z6 326 aa9.47□□□□□ -0.89
MSH5-218ENST00000494646 BOD1L1Q8NFC6 3051 aa9.46□□□□□ -0.89
MSH5-218ENST00000494646 OR5K4A6NMS3 321 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 PDZK1P1A8MUH7 402 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 HGSO14964 777 aaPredicted RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 KMOO15229 486 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 DUX1O43812 170 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 THRAP10827 490 aa9.46□□□□□ -0.9
MSH5-218ENST00000494646 ZNF7P17097 686 aaPredicted RBP9.46□□□□□ -0.9
MSH5-218ENST00000494646 WT1P19544 449 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms