RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ZSCAN1Q8NBB4 408 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CCNYQ8ND76 341 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 OR56A4Q8NGH8 313 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 LRRC45Q96CN5 670 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CELF6Q96J87 481 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CCDC74BQ96LY2 380 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 TSGA13Q96PP4 275 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CMKLR1Q99788 373 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 SUV39H2Q9H5I1 410 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 SP110Q9HB58 689 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 FAM114A2Q9NRY5 505 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 ETNK2Q9NVF9 386 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 ARGLU1Q9NWB6 273 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 PAK5Q9P286 719 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 DKK3Q9UBP4 350 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 ASIC3Q9UHC3 531 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 MFHAS1Q9Y4C4 1052 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 PCDHB11Q9Y5F2 797 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 ITPR2Q14571 2701 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CRYBG3Q68DQ2 2970 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 A0A0U1RQS6 177 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 GOLGA6CA6NDK9 693 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 GOLGA6BA6NDN3 693 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 KCNN4O15554 427 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 TTI1O43156 1089 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 ERLIN1O75477 346 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 KRT14P02533 472 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 FGF1P05230 155 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 RHOXF2BP0C7M4 288 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 GOLGA6DP0CG33 693 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 TNFRSF8P28908 595 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 CD1CP29017 333 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 MMP12P39900 470 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 CAV1Q03135 178 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 AP1B1Q10567 949 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 KCNAB2Q13303 367 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 SERINC3Q13530 473 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 ATP1A1-AS1Q5TC04 95 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 TTC27Q6P3X3 843 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 CEP128Q6ZU80 1094 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 PCGF5Q86SE9 256 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 ZNF761Q86XN6 746 aaPredicted RBP11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 ZNF599Q96NL3 588 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 RHOXF2Q9BQY4 288 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 ERP44Q9BS26 406 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 TMEM121Q9BTD3 319 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 LRRC1Q9BTT6 524 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 OCIAD1Q9NX40 245 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 GOLGA6AQ9NYA3 693 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 TRHDEQ9UKU6 1024 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 PLAAQ9Y263 795 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 DGKBQ9Y6T7 804 aa11.69□□□□□ -0.54
CSNK1E-212ENST00000494610 TRBV23OR9-2A0A075B6M9 112 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 UQCRHLA0A096LP55 91 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 TSPAN11A1L157 253 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 C5orf60A6NFR6 353 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 TOR1BO14657 336 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 IFNB1P01574 187 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 UQCRHP07919 91 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 PRKAR1AP10644 381 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 NR1D1P20393 614 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 CSF2RBP32927 897 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 UGT1A3P35503 534 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 FDFT1P37268 417 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 POLD2P49005 469 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 RENBPP51606 427 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 DRG2P55039 364 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 FOXK1P85037 733 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 RAD51Q06609 339 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 ELP6Q0PNE2 266 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 MTM1Q13496 603 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 RFTN1Q14699 578 aaPredicted RBP11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 WDR93Q6P2C0 686 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 BORAQ6PGQ7 559 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 ARHGAP36Q6ZRI8 547 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 ARHGEF18Q6ZSZ5 1173 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 PIM3Q86V86 326 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 ARHGAP12Q8IWW6 846 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 TSEN2Q8NCE0 465 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 OR6C4Q8NGE1 309 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 CASKIN2Q8WXE0 1202 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 ART4Q93070 314 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 SNF8Q96H20 258 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 SPATA13Q96N96 652 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 CTRCQ99895 268 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 FAM118BQ9BPY3 351 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 TSPYL1Q9H0U9 437 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 CARS2Q9HA77 564 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 PDFQ9HBH1 243 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 SAE1Q9UBE0 346 aaPredicted RBP11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 ATP8A1Q9Y2Q0 1164 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 CELSR2Q9HCU4 2923 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 LRBAP50851 2863 aa11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 SPTBN1Q01082 2364 aaKnown RBP11.68□□□□□ -0.54
CSNK1E-212ENST00000494610 ICE1Q9Y2F5 2266 aa11.67□□□□□ -0.54
CSNK1E-212ENST00000494610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms