RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ZNF449Q6P9G9 518 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 PAPD4Q6PIY7 484 aaKnown RBP4.17□□□□□ -1.74
CMSS1-207ENST00000494412 B3GNT6Q6ZMB0 384 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 ZBTB49Q6ZSB9 765 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 SPATA21Q7Z572 469 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 HOOK3Q86VS8 718 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 TMEM173Q86WV6 379 aaPredicted RBP4.17□□□□□ -1.74
CMSS1-207ENST00000494412 KLHL7Q8IXQ5 586 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 RASGEF1CQ8N431 466 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 SLC44A5Q8NCS7 719 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 OR8H1Q8NGG4 311 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 WDR20Q8TBZ3 569 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 IGFBPL1Q8WX77 278 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 APBB2Q92870 758 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 WDR77Q9BQA1 342 aaPredicted RBP4.17□□□□□ -1.74
CMSS1-207ENST00000494412 ABHD6Q9BV23 337 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 KRTAP17-1Q9BYP8 105 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 KCNN2Q9H2S1 579 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 MAGIXQ9H6Y5 334 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 MAP6D1Q9H9H5 199 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 SEBOXQ9HB31 216 aaPredicted RBP4.17□□□□□ -1.74
CMSS1-207ENST00000494412 TMEM51Q9NW97 253 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 ARMCX3Q9UH62 379 aaPredicted RBP4.17□□□□□ -1.74
CMSS1-207ENST00000494412 IGSF1Q8N6C5 1336 aa4.17□□□□□ -1.74
CMSS1-207ENST00000494412 DDX39AO00148 427 aaKnown RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CYR61O00622 381 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ZNF263O14978 683 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CLIC2O15247 247 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 SLC16A5O15375 505 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 HTATSF1O43719 755 aaKnown RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 GBAP04062 536 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CTSAP10619 480 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CASTP20810 708 aaKnown RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CALRP27797 417 aaKnown RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 GABRA5P31644 462 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CRKLP46109 303 aaKnown RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ME1P48163 572 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 PTH2RP49190 550 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ZNF75DP51815 510 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CSNK2A1P68400 391 aaPredicted RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 HSPB3Q12988 150 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 MAD2L1Q13257 205 aaPredicted RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 PTPRCAPQ14761 206 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 MEP1BQ16820 701 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 GLRA4Q5JXX5 417 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ASPHD1Q5U4P2 390 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 SFMBT2Q5VUG0 894 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 DUS1LQ6P1R4 473 aaKnown RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ZNF782Q6ZMW2 699 aaPredicted RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 SHFQ7M4L6 423 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 PATL1Q86TB9 770 aaKnown RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 CSNK2A3Q8NEV1 391 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 BICD2Q8TD16 824 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 HASPINQ8TF76 798 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ZFAND2BQ8WV99 257 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 RSPH1Q8WYR4 309 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ORAI1Q96D31 301 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 GRAMD2BQ96HH9 432 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 HES6Q96HZ4 224 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ZFYVE19Q96K21 471 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 RMDN2Q96LZ7 410 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 MS4A10Q96PG2 267 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 SORCS2Q96PQ0 1159 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 SMC6Q96SB8 1091 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 OLFM1Q99784 485 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 EGFL8Q99944 293 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 HAUS8Q9BT25 410 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 MLPHQ9BV36 600 aaPredicted RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 TMEM39BQ9GZU3 492 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 EQTNQ9NQ60 294 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 SEMA4GQ9NTN9 838 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ABCB8Q9NUT2 735 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 TMEM184CQ9NVA4 438 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 PRMT7Q9NVM4 692 aaPredicted RBP4.16□□□□□ -1.74
CMSS1-207ENST00000494412 OR6C3Q9NZP0 311 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 MSRB1Q9NZV6 116 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 HEY2Q9UBP5 337 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ACSL5Q9ULC5 683 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 LIPT1Q9Y234 373 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 B3GALT5Q9Y2C3 310 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 ABCC9O60706 1549 aa4.16□□□□□ -1.74
CMSS1-207ENST00000494412 A0A0G2JK05 382 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 A0A1W2PPM1 405 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 LINC01548A6NM66 108 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 B4DGG1 531 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 TRIM77I1YAP6 450 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 RTCAO00442 366 aaKnown RBP4.15□□□□□ -1.75
CMSS1-207ENST00000494412 KERAO60938 352 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 MOSPD3O75425 235 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 ZFYP08048 801 aaPredicted RBP4.15□□□□□ -1.75
CMSS1-207ENST00000494412 FAM58BPP0C7Q3 252 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 DDX5P17844 614 aaKnown RBP4.15□□□□□ -1.75
CMSS1-207ENST00000494412 HLA-DPA1P20036 260 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 AZGP1P25311 298 aaKnown RBP4.15□□□□□ -1.75
CMSS1-207ENST00000494412 ARHGAP25P42331 645 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 RAD23BP54727 409 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 P2RX3P56373 397 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 SNRPEP62304 92 aaKnown RBP4.15□□□□□ -1.75
CMSS1-207ENST00000494412 ID2Q02363 134 aa4.15□□□□□ -1.75
CMSS1-207ENST00000494412 FOXM1Q08050 763 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms