RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CCL4P13236 92 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 PSMB4P28070 264 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 CDC25BP30305 580 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 SLC5A2P31639 672 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 PTPN7P35236 360 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 NAP1L1P55209 391 aaKnown RBP12.46□□□□□ -0.41
HSPG2-212ENST00000493940 RWDD2BP57060 319 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 DCDC1P59894 354 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 EIF3EP60228 445 aaKnown RBP12.46□□□□□ -0.41
HSPG2-212ENST00000493940 XRCC4Q13426 336 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 TGIF1Q15583 401 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 PLA2G4EQ3MJ16 856 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 ANKRD20A2Q5SQ80 823 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 ANKRD20A1Q5TYW2 823 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 ANKRD20A3Q5VUR7 823 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 DENND5AQ6IQ26 1287 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 IYDQ6PHW0 289 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 CRTC3Q6UUV7 619 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 XKR5Q6UX68 686 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 RANBP10Q6VN20 620 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 C11orf96Q7Z7L8 435 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 CLEC14AQ86T13 490 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 FBXO39Q8N4B4 442 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 TRAM1L1Q8N609 369 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 LSM14AQ8ND56 463 aaKnown RBP12.46□□□□□ -0.41
HSPG2-212ENST00000493940 CCDC110Q8TBZ0 833 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 COL26A1Q96A83 441 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 CARD9Q9H257 536 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 TRIM39Q9HCM9 518 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 HAUS2Q9NVX0 235 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
HSPG2-212ENST00000493940 CFAP46Q8IYW2 2715 aa12.46□□□□□ -0.41
HSPG2-212ENST00000493940 BSNQ9UPA5 3926 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 C9orf172C9J069 976 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 SNX2O60749 519 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 ZIC2O95409 532 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-212ENST00000493940 EPOP01588 193 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 BRAFP15056 766 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 RBMS1P29558 406 aaKnown RBP12.45□□□□□ -0.42
HSPG2-212ENST00000493940 HMGCLP35914 325 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 GDF10P55107 478 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 PCBP4P57723 403 aaKnown RBP12.45□□□□□ -0.42
HSPG2-212ENST00000493940 CLN3Q13286 438 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 SPARCL1Q14515 664 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 CHRNA6Q15825 494 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 LRRC69Q6ZNQ3 347 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 LSMEM2Q8N112 164 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 ZNF248Q8NDW4 579 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 BLOC1S5Q8TDH9 187 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 GRAMD1AQ96CP6 724 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 VAT1Q99536 393 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 ZSCAN5AQ9BUG6 496 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 FICDQ9BVA6 458 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 GBA3Q9H227 469 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 KLC4Q9NSK0 619 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 FOXJ2Q9P0K8 574 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 PISDQ9UG56 409 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 RSPH14Q9UHP6 348 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 EFR3BQ9Y2G0 817 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 LOXL2Q9Y4K0 774 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 ARL5AQ9Y689 179 aa12.45□□□□□ -0.42
HSPG2-212ENST00000493940 CCDC66A2RUB6 948 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 ATXN7O15265 892 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 KCNN4O15554 427 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 RRP8O43159 456 aaKnown RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 KLK10O43240 276 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 MTSS1O43312 755 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 C1QL1O75973 258 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 METTL18O95568 372 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 CPNE6O95741 557 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 PRB1P04280 392 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 ITGA2BP08514 1039 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 FGF3P11487 239 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 GPR3P46089 330 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 FASLGP48023 281 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 CTSCP53634 463 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 LIMK2P53671 638 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 TMEM115Q12893 351 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 KLF1Q13351 362 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 MPP3Q13368 585 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 NFATC2Q13469 925 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 SQSTM1Q13501 440 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 KCTD19Q17RG1 926 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 ZNF569Q5MCW4 686 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 PHF19Q5T6S3 580 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 DARS2Q6PI48 645 aaKnown RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 FAM151BQ6UXP7 276 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 KIAA1328Q86T90 577 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 PIM3Q86V86 326 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 KCNE4Q8WWG9 221 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 USP7Q93009 1102 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 HES6Q96HZ4 224 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 CCDC74BQ96LY2 380 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 TMEM74Q96NL1 305 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 FCRL3Q96P31 734 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 PLEKHG4BQ96PX9 1271 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 TBC1D10AQ9BXI6 508 aa12.44□□□□□ -0.42
HSPG2-212ENST00000493940 LUC7LQ9NQ29 371 aaKnown RBP12.44□□□□□ -0.42
HSPG2-212ENST00000493940 THSD1Q9NS62 852 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms