RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TIMP2P16035 220 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ITGB6P18564 788 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 TFEBP19484 476 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 FMO1Q01740 532 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 SLC34A1Q06495 639 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 KCNAB1Q14722 419 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 AANATQ16613 207 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 BRMS1LQ5PSV4 323 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 C10orf120Q5SQS8 335 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ALG1LQ6GMV1 187 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 RBM44Q6ZP01 1051 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 LRRC74BQ6ZQY2 392 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 SCD5Q86SK9 330 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 SLC44A3Q8N4M1 653 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 WDTC1Q8N5D0 677 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 DPP10Q8N608 796 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CELF5Q8N6W0 485 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 EDEM1Q92611 657 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 BCL7BQ9BQE9 202 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 DDX47Q9H0S4 455 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 LRMDAQ9H2I8 198 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 ETNK1Q9HBU6 452 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 TMBIM4Q9HC24 238 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CAPN10Q9HC96 672 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 OR6C2Q9NZP2 312 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 MBD1Q9UIS9 605 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 CDV3Q9UKY7 258 aaKnown RBP11.54□□□□□ -0.56
BRCA1-222ENST00000493919 AK5Q9Y6K8 562 aa11.54□□□□□ -0.56
BRCA1-222ENST00000493919 A0A1W2PQJ5 194 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 FAM221AA4D161 298 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 YJEFN3A6XGL0 299 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 PRR5-ARHGAP8B1AHC4 643 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 DCXO43602 365 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 KLHL18O94889 574 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 THEGLP0DJG4 465 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 PSMC3P17980 439 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 GDI1P31150 447 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 GPX6P59796 221 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 NOMO3P69849 1222 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 PHC1P78364 1004 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 PTPN20Q4JDL3 420 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 C2CD6Q53TS8 623 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 SLC6A19Q695T7 634 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 BNC2Q6ZN30 1099 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-222ENST00000493919 HFE2Q6ZVN8 426 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 UTS2BQ765I0 119 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 BHLHA9Q7RTU4 235 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 MIB1Q86YT6 1006 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 SIMC1Q8NDZ2 872 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 SRFBP1Q8NEF9 429 aaKnown RBP11.53□□□□□ -0.56
BRCA1-222ENST00000493919 MCOLN3Q8TDD5 553 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 BPIFB1Q8TDL5 484 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 DEPDC1BQ8WUY9 529 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 CPA5Q8WXQ8 436 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 RADILQ96JH8 1075 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 C7orf34Q96L11 122 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 HOXD1Q9GZZ0 328 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 TRPV4Q9HBA0 871 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 CPNE7Q9UBL6 633 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 RPS6KA6Q9UK32 745 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 DTNAQ9Y4J8 743 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 MAD1L1Q9Y6D9 718 aa11.53□□□□□ -0.56
BRCA1-222ENST00000493919 PAPSS1O43252 624 aaPredicted RBP11.52□□□□□ -0.56
BRCA1-222ENST00000493919 CDK14O94921 469 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 LSM8O95777 96 aaKnown RBP11.52□□□□□ -0.56
BRCA1-222ENST00000493919 APOC1P02654 83 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 LTFP02788 710 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 OPN1MWP04001 364 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 ERBB2P04626 1255 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 ANXA8P13928 327 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 CHRNB2P17787 502 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 KCNJ5P48544 419 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 RPIAP49247 311 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 HK2P52789 917 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 EFEMP1Q12805 493 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 GTDC1Q4AE62 458 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 TCHHL1Q5QJ38 904 aaPredicted RBP11.52□□□□□ -0.56
BRCA1-222ENST00000493919 ANXA8L1Q5VT79 327 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 AGAP7PQ5VUJ5 663 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 ERICH5Q6P6B1 374 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 CLEC2AQ6UVW9 174 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 SATL1Q86VE3 508 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 MMGT1Q8N4V1 131 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 CAPSLQ8WWF8 208 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 MYDGFQ969H8 173 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 MARC2Q969Z3 335 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 TMIGD2Q96BF3 282 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 GRAMD1AQ96CP6 724 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.56
BRCA1-222ENST00000493919 ZFYVE19Q96K21 471 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 AGPAT1Q99943 283 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 TMEM79Q9BSE2 394 aa11.52□□□□□ -0.56
BRCA1-222ENST00000493919 TRMT61BQ9BVS5 477 aaKnown RBP11.52□□□□□ -0.56
BRCA1-222ENST00000493919 CCDC134Q9H6E4 229 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms