RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PDE1CQ14123 709 aaPredicted RBP19.17■□□□□ 0.66
USP39-218ENST00000493829 LDLRAP1Q5SW96 308 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 MROH9Q5TGP6 573 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 LYPLAL1Q5VWZ2 237 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 LAYNQ6UX15 382 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 SPNS2Q8IVW8 549 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 RBFAQ8N0V3 343 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 DTX3LQ8TDB6 740 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 ELMO2Q96JJ3 720 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 TCF12Q99081 682 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 CLPBQ9H078 707 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 OR2AG1Q9H205 316 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 MTO1Q9Y2Z2 717 aaKnown RBP19.17■□□□□ 0.66
USP39-218ENST00000493829 PRR33A8MZF0 331 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 PRAMEF26H0Y7S4 382 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 PYGLP06737 847 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 PPARGP37231 505 aaPredicted RBP19.17■□□□□ 0.66
USP39-218ENST00000493829 PGGT1BP53609 377 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 LIMK2P53671 638 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 CSE1LP55060 971 aaKnown RBP19.17■□□□□ 0.66
USP39-218ENST00000493829 GRTP1Q5TC63 336 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 ZNF549Q6P9A3 640 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 LPCAT2Q7L5N7 544 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 NLRP8Q86W28 1048 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 RGL4Q8IZJ4 473 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 TMEM145Q8NBT3 493 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 BMFQ96LC9 184 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 ORAI3Q9BRQ5 295 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 TEX101Q9BY14 249 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 PCED1AQ9H1Q7 454 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 RHOJQ9H4E5 214 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 PHPT1Q9NRX4 125 aaPredicted RBP19.17■□□□□ 0.66
USP39-218ENST00000493829 DMTF1Q9Y222 760 aa19.17■□□□□ 0.66
USP39-218ENST00000493829 FAM95CA0A1B0GW59 222 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 OR2AG2A6NM03 316 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 MAP2K7O14733 419 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 HRO43593 1189 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 CDH16O75309 829 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 ITGA2BP08514 1039 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 ZNF7P17097 686 aaPredicted RBP19.16■□□□□ 0.66
USP39-218ENST00000493829 ITGB6P18564 788 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 CD27P26842 260 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 SPRP35270 261 aaPredicted RBP19.16■□□□□ 0.66
USP39-218ENST00000493829 POLD2P49005 469 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 DHPSP49366 369 aaPredicted RBP19.16■□□□□ 0.66
USP39-218ENST00000493829 ITIH4Q14624 930 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 CTSL3PQ5NE16 218 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 ADGRD1Q6QNK2 874 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 CEP68Q76N32 757 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 TAOK1Q7L7X3 1001 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 CYP4X1Q8N118 509 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 FOXJ1Q92949 421 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 MCMBPQ9BTE3 642 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 APOOQ9BUR5 198 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 VIPAS39Q9H9C1 493 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 CAB39LQ9H9S4 337 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 FETUBQ9UGM5 382 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 VPS9D1Q9Y2B5 631 aa19.16■□□□□ 0.66
USP39-218ENST00000493829 IQCF5A8MTL0 148 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 CFAP99D6REC4 459 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 AGPSO00116 658 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 PRMT5O14744 637 aaPredicted RBP19.15■□□□□ 0.66
USP39-218ENST00000493829 TCEA3O75764 348 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 MYCLP1P12525 358 aaPredicted RBP19.15■□□□□ 0.66
USP39-218ENST00000493829 TPRG1LQ5T0D9 272 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 PTRHD1Q6GMV3 140 aaKnown RBP19.15■□□□□ 0.66
USP39-218ENST00000493829 CRTC3Q6UUV7 619 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 ADGRG6Q86SQ4 1221 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 KRT222Q8N1A0 295 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 RASGEF1AQ8N9B8 481 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 OR13H1Q8NG92 308 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 SGF29Q96ES7 293 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 COX14Q96I36 57 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 ROPN1BQ9BZX4 212 aaPredicted RBP19.15■□□□□ 0.66
USP39-218ENST00000493829 P2RY12Q9H244 342 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 CCDC68Q9H2F9 335 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 ROPN1Q9HAT0 212 aaPredicted RBP19.15■□□□□ 0.66
USP39-218ENST00000493829 ZSCAN32Q9NX65 697 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 ATXN10Q9UBB4 475 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 MOSPD1Q9UJG1 213 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 ZNF180Q9UJW8 692 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 SLC39A10Q9ULF5 831 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 ABCA7Q8IZY2 2146 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 THADAQ6YHU6 1953 aa19.15■□□□□ 0.66
USP39-218ENST00000493829 IGLV3-16A0A075B6K0 115 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 HMX2A2RU54 273 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 A6NNZ2 444 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 TRIM49D1C9J1S8 452 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 CACNB4O00305 520 aaPredicted RBP19.14■□□□□ 0.66
USP39-218ENST00000493829 SCAMP1O15126 338 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 NIPSNAP2O75323 286 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 RALBP11234 206 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 TRIM23P36406 574 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 NSG1P42857 185 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 SERPINB9P50453 376 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 TMEM115Q12893 351 aaPredicted RBP19.14■□□□□ 0.66
USP39-218ENST00000493829 PLA2G4EQ3MJ16 856 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 Q6ZSR6 202 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 GALNT7Q86SF2 657 aa19.14■□□□□ 0.66
USP39-218ENST00000493829 PIM3Q86V86 326 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms