RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TERF1P54274 439 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 RPL24P83731 157 aaKnown RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 PLIN5Q00G26 463 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 DDX10Q13206 875 aaKnown RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 PDE1CQ14123 709 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 RBM39Q14498 530 aaKnown RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 ASTE1Q2TB18 679 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 RARS2Q5T160 578 aaKnown RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 PDSS1Q5T2R2 415 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 ACSM2BQ68CK6 577 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 FAM109BQ6ICB4 259 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 CFAP77Q6ZQR2 320 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 TMPRSS12Q86WS5 348 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 NGEFQ8N5V2 710 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 GCSAMQ8N6F7 178 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 TEX19Q8NA77 164 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 TRMT61BQ9BVS5 477 aaKnown RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 PIGMQ9H3S5 423 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 IRAK4Q9NWZ3 460 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 PRSS47A8MTI9 375 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 EIF3DO15371 548 aaKnown RBP eCLIP4.09□□□□□ -1.75
ITGB1-216ENST00000493758 SYNGR3O43761 229 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 USO1O60763 962 aaKnown RBP4.09□□□□□ -1.75
ITGB1-216ENST00000493758 BAIAP3O94812 1187 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 ATP1A1P05023 1023 aaKnown RBP4.09□□□□□ -1.75
ITGB1-216ENST00000493758 CSF2RAP15509 400 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 GPR143P51810 404 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 CTSCP53634 463 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 ISL1P61371 349 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 PRAMEP78395 509 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 SIRPB2Q5JXA9 342 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 LRIF1Q5T3J3 769 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 STXBP5Q5T5C0 1151 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 FAAH2Q6GMR7 532 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 TMEM154Q6P9G4 183 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 ZNF852Q6ZMS4 543 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 TRMT1LQ7Z2T5 733 aaKnown RBP4.09□□□□□ -1.75
ITGB1-216ENST00000493758 TICAM1Q8IUC6 712 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 EPHX4Q8IUS5 362 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 KLHDC9Q8NEP7 349 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 SLC24A4Q8NFF2 622 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 KCNG4Q8TDN1 519 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 SLC44A1Q8WWI5 657 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 POMGNT1Q8WZA1 660 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 HDAC2Q92769 488 aaKnown RBP4.09□□□□□ -1.75
ITGB1-216ENST00000493758 PGAM5Q96HS1 289 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 DACH2Q96NX9 599 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 RRP7BPQ9NSQ0 103 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 TAAR2Q9P1P5 351 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 MDFICQ9P1T7 246 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 AASSQ9UDR5 926 aa4.09□□□□□ -1.75
ITGB1-216ENST00000493758 PRKNO60260 465 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-216ENST00000493758 SLC22A3O75751 556 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 OR2C1O95371 312 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 HIST1H2ABP04908 130 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 ACADMP11310 421 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 SELLP14151 372 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 TMEM11P17152 192 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 HIST1H2ADP20671 130 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 TCEA1P23193 301 aaKnown RBP4.08□□□□□ -1.76
ITGB1-216ENST00000493758 CDKN1AP38936 164 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 PIK3CAP42336 1068 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 RXRGP48443 463 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 NR2C2P49116 596 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 MLLT10P55197 1068 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 SPOCK1Q08629 439 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 EIF4A2Q14240 407 aaKnown RBP4.08□□□□□ -1.76
ITGB1-216ENST00000493758 MED22Q15528 200 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 NAB2Q15742 525 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 OR7E24Q6IFN5 339 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 TPRG1Q6ZUI0 275 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 KCTD8Q6ZWB6 473 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 HIST3H2AQ7L7L0 130 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 SDCCAG8Q86SQ7 713 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-216ENST00000493758 MAP7D3Q8IWC1 876 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 DMBX1Q8NFW5 382 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 OR52I2Q8NH67 350 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 PHF21AQ96BD5 680 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 ABHD8Q96I13 439 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 ZNF583Q96ND8 569 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 OR2A14Q96R47 310 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 C1QTNF1Q9BXJ1 281 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 ITPAQ9BY32 194 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 MARCH4Q9P2E8 410 aaPredicted RBP4.08□□□□□ -1.76
ITGB1-216ENST00000493758 LYVE1Q9Y5Y7 322 aa4.08□□□□□ -1.76
ITGB1-216ENST00000493758 TAF1P21675 1872 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 ARHGEF40Q8TER5 1519 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 IGLV5-45A0A087WSX0 123 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 PI4KAP2A4QPH2 592 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 TMEM8BA6NDV4 472 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 PRR23AA6NEV1 266 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 OGG1O15527 345 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 TMCC2O75069 709 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 RNASEH2AO75792 299 aaKnown RBP4.07□□□□□ -1.76
ITGB1-216ENST00000493758 WISP2O76076 250 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 MCCP23508 829 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 ARL3P36405 182 aa4.07□□□□□ -1.76
ITGB1-216ENST00000493758 ARCN1P48444 511 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms