RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 UFD1Q92890 307 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MARVELD3Q96A59 401 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MUS81Q96NY9 551 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 NEDD4LQ96PU5 975 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 EYA3Q99504 573 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MMP28Q9H239 520 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ADAMTS10Q9H324 1103 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CPVLQ9H3G5 476 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 WDR55Q9H6Y2 383 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 PAK1IP1Q9NWT1 392 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SLC23A1Q9UHI7 598 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 IPO11Q9UI26 975 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 PIPSLA2A3N6 862 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF99A8MXY4 864 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 LACTBL1A8MY62 500 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 PAPSS1O43252 624 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 NBNO60934 754 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 IL1BP01584 269 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MT-ND1P03886 318 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CSF2P04141 144 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CD63P08962 238 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SLC2A3P11169 496 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 DPEP1P16444 411 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ADORA2AP29274 412 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 RPS9P46781 194 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ATXN1P54253 815 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 DYNLT1P63172 113 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF45Q02386 682 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 TNK2Q07912 1038 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 GRB10Q13322 594 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF273Q14593 569 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF169Q14929 603 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SMAD1Q15797 465 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ADPRMQ3LIE5 342 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CCNJQ5T5M9 372 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 POMZP3Q6PJE2 187 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 C5orf46Q6UWT4 87 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 RDH13Q8NBN7 331 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 GMCL1P1Q8NEA9 526 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SLC30A5Q8TAD4 765 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF577Q9BSK1 485 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 NIFKQ9BYG3 293 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 YTHDF1Q9BYJ9 559 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MS4A7Q9GZW8 240 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 POLE3Q9NRF9 147 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF275Q9NSD4 429 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SETD4Q9NVD3 440 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 IMPAD1Q9NX62 359 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ERVK13-1Q9NX77 482 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 DNPEPQ9ULA0 475 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ACSL5Q9ULC5 683 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 GRXCR2A6NFK2 248 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 TMEM191CA6NGB0 347 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 POTEMA6NI47 508 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 FAM155AB1AL88 458 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 TLL1O43897 1013 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 BMP3P12645 472 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 GBX2P52951 348 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 AP1S2P56377 157 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 RPP30P78346 268 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CYP4F8P98187 520 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 GAD2Q05329 585 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 GRB7Q14451 532 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SSX2Q16385 188 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SLC36A3Q495N2 470 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 IL31Q6EBC2 164 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 TAF2Q6P1X5 1199 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 LRFN4Q6PJG9 635 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MAMDC2Q7Z304 686 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZC3HC1Q86WB0 502 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 C8orf59Q8N0T1 100 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CAMKK1Q8N5S9 505 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 AMER2Q8N7J2 671 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF527Q8NB42 609 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 RP9Q8TA86 221 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 DNAJA4Q8WW22 397 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 YIPF5Q969M3 257 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 DNAJC19Q96DA6 116 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MTFMTQ96DP5 389 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZDHHC12Q96GR4 267 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 MOGAT1Q96PD6 335 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 TRNT1Q96Q11 434 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 OR52B2Q96RD2 323 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 NODALQ96S42 347 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 SLC9A7Q96T83 725 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 DCSTAMPQ9H295 470 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF768Q9H5H4 540 aaKnown RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 UBE2TQ9NPD8 197 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-205ENST00000493587 CNTN3Q9P232 1028 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 TCEAL9Q9UHQ7 104 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 ENTPD4Q9Y227 616 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 FIS1Q9Y3D6 152 aa6.81□□□□□ -1.32
VPS13B-205ENST00000493587 LOC100506127A0A0U1RQW1 187 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 AGAP5A6NIR3 686 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 TO15178 435 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 HTR3BO95264 441 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 CCNDBP1O95273 360 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ADORA3P0DMS8 318 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 PRG2P13727 222 aa6.8□□□□□ -1.32
VPS13B-205ENST00000493587 ERVK-25P63136 954 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms