RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LRRC69Q6ZNQ3 347 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 MARK2Q7KZI7 788 aaKnown RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 PPIL6Q8IXY8 311 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 ZNF548Q8NEK5 533 aaPredicted RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 GDAP1Q8TB36 358 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 LMX1AQ8TE12 382 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 SAP25Q8TEE9 199 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 BTN2A2Q8WVV5 523 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 GLYATL1Q969I3 302 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 CRELD1Q96HD1 420 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 COX14Q96I36 57 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 CNDP2Q96KP4 475 aaKnown RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 RANBP9Q96S59 729 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 LRRC61Q9BV99 259 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 TRIM31Q9BZY9 425 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 CARS2Q9HA77 564 aaKnown RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 XAB2Q9HCS7 855 aaKnown RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 ARFGAP3Q9NP61 516 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 IL26Q9NPH9 171 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 NLE1Q9NVX2 485 aaPredicted RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 SYBUQ9NX95 663 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 BFARQ9NZS9 450 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 SPASTQ9UBP0 616 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 KLF15Q9UIH9 416 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 APPL1Q9UKG1 709 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 PNMA8BQ9ULN7 279 aaPredicted RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 TMEM98Q9Y2Y6 226 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 TCAF1Q9Y4C2 921 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 MRFAP1Q9Y605 127 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 OAS3Q9Y6K5 1087 aaKnown RBP11.48□□□□□ -0.57
CTSA-209ENST00000493522 KNTC1P50748 2209 aa11.48□□□□□ -0.57
CTSA-209ENST00000493522 ASH1LQ9NR48 2969 aaKnown RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 TNFRSF10CO14798 259 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 RRP8O43159 456 aaKnown RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 AQP9O43315 295 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 RAD51CO43502 376 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 SRP72O76094 671 aaKnown RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 SLC25A14O95258 325 aaPredicted RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 TNFP01375 233 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 ITGALP20701 1170 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 ADRA1DP25100 572 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 MC4RP32245 332 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 POLD2P49005 469 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 NPY2RP49146 381 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 HK3P52790 923 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 C19orf57Q0VDD7 668 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 PRRT3Q5FWE3 981 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 ZNF648Q5T619 568 aaPredicted RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 RNASEH2BQ5TBB1 312 aaKnown RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 LRRC8BQ6P9F7 803 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 ZNF572Q7Z3I7 529 aaPredicted RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 PCGF5Q86SE9 256 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 NAT8LQ8N9F0 302 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 STYXQ8WUJ0 223 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 SNF8Q96H20 258 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 VPS35Q96QK1 796 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 IL22Q9GZX6 179 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 ASB8Q9H765 288 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 UCKL1Q9NWZ5 548 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 CRLS1Q9UJA2 301 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 CNOT6Q9ULM6 557 aaKnown RBP11.47□□□□□ -0.57
CTSA-209ENST00000493522 SUFUQ9UMX1 484 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 SLC17A4Q9Y2C5 497 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 SLC30A1Q9Y6M5 507 aa11.47□□□□□ -0.57
CTSA-209ENST00000493522 FAM187AA6NFU0 413 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 MROH6A6NGR9 719 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 TK2O00142 265 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 GAPDHSO14556 408 aaPredicted RBP11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A9O60656 530 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 AVILO75366 819 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 MTX2O75431 263 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 CEACAM5P06731 702 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 IVLP07476 585 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 CELA2BP08218 269 aaPredicted RBP11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A6P19224 532 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A1P22309 533 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A4P22310 534 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 DGKAP23743 735 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 AKT1P31749 480 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A3P35503 534 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 UGT1A5P35504 534 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 EIF2S3P41091 472 aaKnown RBP11.46□□□□□ -0.57
CTSA-209ENST00000493522 ACADVLP49748 655 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 DNAJC3Q13217 504 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 C1orf61Q13536 156 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 PEX6Q13608 980 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 GTF2H3Q13889 308 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 SKIDA1Q1XH10 827 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 ZRANB3Q5FWF4 1079 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 PCID2Q5JVF3 399 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 HES3Q5TGS1 186 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 C8orf74Q6P047 294 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 CASC4Q6P4E1 433 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 MICALCLQ6ZW33 695 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 NLRP9Q7RTR0 991 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 KANSL1Q7Z3B3 1105 aa11.46□□□□□ -0.57
CTSA-209ENST00000493522 MAATS1Q7Z4T9 603 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms