RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 CYP11B2P19099 503 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 METAP2P50579 478 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 HSD17B7P56937 341 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 STX1BP61266 288 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ASIC1P78348 528 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 SIM1P81133 766 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 HSPB3Q12988 150 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 KLHL26Q53HC5 615 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 DNTTIP2Q5QJE6 756 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 GGNBP1Q5YKI7 109 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 PLEKHA7Q6IQ23 1121 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 KCTD9Q7L273 389 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 DZIP1Q86YF9 867 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 SFRP1Q8N474 314 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 KDM1BQ8NB78 822 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 AGBL3Q8NEM8 1001 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 CACTINQ8WUQ7 758 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TEKT1Q969V4 418 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 EME1Q96AY2 570 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ZNF333Q96JL9 665 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 COQ10AQ96MF6 247 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 MS4A10Q96PG2 267 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 HNRNPABQ99729 332 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 RAD21L1Q9H4I0 556 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 HPF1Q9NWY4 346 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 STK39Q9UEW8 545 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 SYCE3A1L190 88 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 C2CD4BA6NLJ0 364 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 EIF4E1BA6NMX2 242 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 F8W810 466 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TRIM77I1YAP6 450 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 MGST3O14880 152 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ASAP2O43150 1006 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TLR2O60603 784 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 NR2F2P24468 414 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 PIGAP37287 484 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 CASP3P42574 277 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ST8SIA6P61647 398 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TEFQ10587 303 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 STIM1Q13586 685 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 NEDD9Q14511 834 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 MEP1AQ16819 746 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 EIF2S3LQ2VIR3 472 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 MYLK3Q32MK0 819 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 EARS2Q5JPH6 523 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 PRAMEF17Q5VTA0 474 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 NSUN5P2Q63ZY6 315 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 RNF207Q6ZRF8 634 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TIGD4Q8IY51 512 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 RBFAQ8N0V3 343 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 RASGEF1CQ8N431 466 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 NEK11Q8NG66 645 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 OR7G3Q8NG95 312 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TBC1D16Q8TBP0 767 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 GPT2Q8TD30 523 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 BCAS4Q8TDM0 211 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TMEM18Q96B42 140 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 SMC6Q96SB8 1091 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 MYCBPQ99417 103 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 FAM118BQ9BPY3 351 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 INPP5KQ9BT40 448 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 SPXQ9BT56 116 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ESRP2Q9H6T0 727 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 IARS2Q9NSE4 1012 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 RNF146Q9NTX7 359 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ERAP1Q9NZ08 941 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 EPS15L1Q9UBC2 864 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 HOOK1Q9UJC3 728 aaKnown RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 LEF1Q9UJU2 399 aaPredicted RBP4.63□□□□□ -1.67
VPS13A-212ENST00000493341 SNX7Q9UNH6 387 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 TSC22D4Q9Y3Q8 395 aa4.63□□□□□ -1.67
VPS13A-212ENST00000493341 ACEP12821 1306 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 TMEM8BA6NDV4 472 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 STMND1H3BQB6 276 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 ST8SIA3O43173 380 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 ZBTB43O43298 467 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 REC8O95072 547 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 NDUFB4O95168 129 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 IGHDP01880 384 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 RLN1P04808 185 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 EEF2P13639 858 aaKnown RBP4.62□□□□□ -1.67
VPS13A-212ENST00000493341 CDC25CP30307 473 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 NAGLUP54802 743 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 ARF5P84085 180 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 GRIK2Q13002 908 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 HFEQ30201 348 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 AKNAD1Q5T1N1 836 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 TMEM71Q6P5X7 295 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 PAPD4Q6PIY7 484 aaKnown RBP4.62□□□□□ -1.67
VPS13A-212ENST00000493341 TRILQ7L0X0 811 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 RABEPKQ7Z6M1 372 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 ABI3BPQ7Z7G0 1075 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 SFTPA2Q8IWL1 248 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 CLYBLQ8N0X4 340 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 UXS1Q8NBZ7 420 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 DBF4BQ8NFT6 615 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 HEXDCQ8WVB3 486 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 DNASE1L2Q92874 299 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 MAP4K1Q92918 833 aa4.62□□□□□ -1.67
VPS13A-212ENST00000493341 ST6GALNAC6Q969X2 333 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms