RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 SNX20Q7Z614 316 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 TMEM135Q86UB9 458 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 SERPINA9Q86WD7 417 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 SPNS2Q8IVW8 549 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 SFTPA2Q8IWL1 248 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 PHACTR4Q8IZ21 702 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 PDIK1LQ8N165 341 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 RASGEF1AQ8N9B8 481 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 BBOF1Q8ND07 529 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 OR4L1Q8NH43 312 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 GDAP1Q8TB36 358 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 DTX3LQ8TDB6 740 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 IFT81Q8WYA0 676 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 CFAP36Q96G28 342 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 TMEM168Q9H0V1 697 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 ERVMER34-1Q9H9K5 563 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 TRIM39Q9HCM9 518 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 SAMD15Q9P1V8 674 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 SUFUQ9UMX1 484 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 BTBD3Q9Y2F9 522 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 PRSS21Q9Y6M0 314 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 SLC30A1Q9Y6M5 507 aa15.71■□□□□ 0.11
COPS3-210ENST00000492672 SGTAO43765 313 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 OR1I1O60431 355 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 PIAS2O75928 621 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 PYGLP06737 847 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 GIMD1P0DJR0 217 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 HTR1BP28222 390 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 RXRGP48443 463 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 HK3P52790 923 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 CTSCP53634 463 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 TMEM115Q12893 351 aaPredicted RBP15.7■□□□□ 0.1
COPS3-210ENST00000492672 ITGA9Q13797 1035 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 DBN1Q16643 649 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 STPG1Q5TH74 334 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 ZDHHC20Q5W0Z9 365 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 PDPK2PQ6A1A2 396 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 UNC5AQ6ZN44 842 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 DET1Q7L5Y6 550 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 CCDC25Q86WR0 208 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 NXPE1Q8N323 547 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 BEND7Q8N7W2 519 aaPredicted RBP15.7■□□□□ 0.1
COPS3-210ENST00000492672 FBXO36Q8NEA4 188 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 SAP25Q8TEE9 199 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 SGF29Q96ES7 293 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 SCARF2Q96GP6 870 aaPredicted RBP15.7■□□□□ 0.1
COPS3-210ENST00000492672 C19orf43Q9BQ61 176 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 LRRC61Q9BV99 259 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 ZDHHC5Q9C0B5 715 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 CARS2Q9HA77 564 aaKnown RBP15.7■□□□□ 0.1
COPS3-210ENST00000492672 SAYSD1Q9NPB0 183 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 TMEM9BQ9NQ34 198 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 RRAGDQ9NQL2 400 aaPredicted RBP15.7■□□□□ 0.1
COPS3-210ENST00000492672 SLC17A6Q9P2U8 582 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 SLC23A2Q9UGH3 650 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.7■□□□□ 0.1
COPS3-210ENST00000492672 CRLS1Q9UJA2 301 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 V9GYY5 206 aaPredicted RBP15.7■□□□□ 0.1
COPS3-210ENST00000492672 PCNX2A6NKB5 2137 aa15.7■□□□□ 0.1
COPS3-210ENST00000492672 GOLGA4Q13439 2230 aaKnown RBP15.7■□□□□ 0.1
COPS3-210ENST00000492672 MAGEB16A2A368 324 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 SMAPO00193 183 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 TNFRSF10CO14798 259 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 CD3EAPO15446 510 aaKnown RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 NUAK1O60285 661 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 RASGRP1O95267 797 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 CER1O95813 267 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 TNFP01375 233 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 MYF5P13349 255 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 CD59P13987 128 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 ITGALP20701 1170 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 DGKAP23743 735 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 AK4P27144 223 aaPredicted RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 EPHA8P29322 1005 aaPredicted RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 ATXN3P54252 364 aaPredicted RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 PRAMEP78395 509 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 CACNG1Q06432 222 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 LAMB3Q13751 1172 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 PLA2G4EQ3MJ16 856 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 PYCR3Q53H96 274 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 DNAJC21Q5F1R6 531 aaKnown RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 PRRT3Q5FWE3 981 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 ZNF789Q5FWF6 425 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 KIAA0930Q6ICG6 404 aaPredicted RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 TRMT10BQ6PF06 316 aaKnown RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 IL27RAQ6UWB1 636 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 CAPN12Q6ZSI9 719 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 NRROSQ86YC3 692 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 PHYKPLQ8IUZ5 450 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 ZNF547Q8IVP9 402 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 ZBED8Q8IZ13 594 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 DDHD1Q8NEL9 900 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 LMX1AQ8TE12 382 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 CAMK1GQ96NX5 476 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 FAM114A2Q9NRY5 505 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 DNAAF2Q9NVR5 837 aaKnown RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 SMOXQ9NWM0 555 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 APOBEC3BQ9UH17 382 aaKnown RBP15.69■□□□□ 0.1
COPS3-210ENST00000492672 ZNHIT2Q9UHR6 403 aa15.69■□□□□ 0.1
COPS3-210ENST00000492672 GPSM3Q9Y4H4 160 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms