RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SLC44A4Q53GD3 710 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 ALG1LQ6GMV1 187 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 HMBOX1Q6NT76 420 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 SPPL2CQ8IUH8 684 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 LRRC43Q8N309 656 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 GRIN3AQ8TCU5 1115 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 KIAA1191Q96A73 305 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 MTRRQ9UBK8 725 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 VPS51Q9UID3 782 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 CNOT6Q9ULM6 557 aaKnown RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 AP4S1Q9Y587 144 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 PDLIM1O00151 329 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 KIF3CO14782 793 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 EPOP01588 193 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 SMIM18P0DKX4 95 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 OXTRP30559 389 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 ADSLP30566 484 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-220ENST00000492280 GDF5P43026 501 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 TNK2Q07912 1038 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 MBOAT1Q6ZNC8 495 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 GALNT7Q86SF2 657 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 TMEM150AQ86TG1 271 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 PRPF18Q99633 342 aaKnown RBP12.34□□□□□ -0.43
HMGN1-220ENST00000492280 HGH1Q9BTY7 390 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 APOL5Q9BWW9 433 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 GRIP2Q9C0E4 1043 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 HIPK3Q9H422 1215 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 LHX3Q9UBR4 397 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 PRSS21Q9Y6M0 314 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 PLOD2O00469 737 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 ANGPT2O15123 496 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 CHN2P52757 468 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 MYBPC1Q00872 1141 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 BFSP2Q13515 415 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 MAP7D1Q3KQU3 841 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 PAGE3Q5JUK9 113 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 ANKS6Q68DC2 871 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 IGSF21Q96ID5 467 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 TRMOQ9BU70 441 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 GPR63Q9BZJ6 419 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 TFB2MQ9H5Q4 396 aaKnown RBP12.34□□□□□ -0.43
HMGN1-220ENST00000492280 CMTM6Q9NX76 183 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 PDP2Q9P2J9 529 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 PCTPQ9UKL6 214 aa12.34□□□□□ -0.43
HMGN1-220ENST00000492280 ILVBLA1L0T0 632 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 LCHNA4D1U4 455 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ASPDHA6ND91 283 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 AKAP10O43572 662 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 VPS26AO75436 327 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 GGT5P36269 586 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ELAVL2Q12926 359 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 CDH18Q13634 790 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 LIN52Q52LA3 116 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 TICAM1Q8IUC6 712 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ST13P4Q8IZP2 240 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 MIER2Q8N344 545 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 TTC30BQ8N4P2 665 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ZNF599Q96NL3 588 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 DERL2Q9GZP9 239 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ELAC1Q9H777 363 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 INTS7Q9NVH2 962 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 TMEM181Q9P2C4 612 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 SUCOQ9UBS9 1254 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 CD300AQ9UGN4 299 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 PHF24Q9UPV7 400 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 CPQQ9Y646 472 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 FFAR3O14843 346 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 GPR42O15529 346 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 RPS17P08708 135 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 STK19P49842 368 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 MAPRE2Q15555 327 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 CNPY1Q3B7I2 92 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 C5orf22Q49AR2 442 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ADAMTS19Q8TE59 1207 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 CWH43Q9H720 699 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 INTS10Q9NVR2 710 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 EPS15L1Q9UBC2 864 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 ZMYM5Q9UJ78 669 aa12.33□□□□□ -0.44
HMGN1-220ENST00000492280 OAS3Q9Y6K5 1087 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
HMGN1-220ENST00000492280 SNX2O60749 519 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 TRIM16O95361 564 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 CLDN7O95471 211 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 LBPP18428 481 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 IL12AP29459 219 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 TUFMP49411 452 aaKnown RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 KPNA1P52294 538 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 GALNT1Q10472 559 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 DNAJB7Q7Z6W7 309 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-220ENST00000492280 TSPAN33Q86UF1 283 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 SLC15A3Q8IY34 581 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 METTL25Q8N6Q8 603 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 RHEBL1Q8TAI7 183 aa12.32□□□□□ -0.44
HMGN1-220ENST00000492280 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms