RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 BMP1P13497 986 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 BGNP21810 368 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PTAFRP25105 342 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 DNAJB1P25685 340 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PTPN4P29074 926 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 LRPAP1P30533 357 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 EPHX2P34913 555 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CRHR1P34998 444 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ADRA1BP35368 520 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SOX18P35713 384 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GGT5P36269 586 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MAP2K2P36507 400 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MATKP42679 507 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ARCN1P48444 511 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PITPNBP48739 271 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 DHPSP49366 369 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GLUD2P49448 558 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 TAF6P49848 677 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 RNF144AP50876 292 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ZNF81P51508 661 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 HK3P52790 923 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GBX2P52951 348 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ARFIP2P53365 341 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ATXN3P54252 364 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PNLIPRP1P54315 467 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 AIF1P55008 147 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MLLT6P55198 1093 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 FKBP1BP68106 108 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NKX6-1P78426 367 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MRPS5P82675 430 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ATP11AP98196 1134 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ACY1Q03154 408 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC10A2Q12908 348 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NAB1Q13506 487 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ITGA7Q13683 1181 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 FRG1Q14331 258 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PAFAH1B3Q15102 231 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PDK1Q15118 436 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MAPKAPK3Q16644 382 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 KIZQ2M2Z5 673 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CMPK2Q5EBM0 449 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NHSL2Q5HYW2 709 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 EFHC1Q5JVL4 640 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 OTUD1Q5VV17 481 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NCBP2-AS2Q69YL0 99 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ZCCHC12Q6PEW1 402 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 B3GNT6Q6ZMB0 384 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ATG14Q6ZNE5 492 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 FAM83HQ6ZRV2 1179 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 RNF44Q7L0R7 432 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GPR142Q7Z601 462 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PLEKHH3Q7Z736 793 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CLNKQ7Z7G1 428 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MON1AQ86VX9 555 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 OSTM1Q86WC4 334 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CXorf67Q86X51 503 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CEP57Q86XR8 500 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 P3H2Q8IVL5 708 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CDH26Q8IXH8 852 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 MAML2Q8IZL2 1156 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SIX6OS1Q8N1H7 587 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 RTL3Q8N8U3 475 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GPR150Q8NGU9 434 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 OR6B3Q8NGW1 331 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 METTL6Q8TCB7 284 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ACMSDQ8TDX5 336 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 HASPINQ8TF76 798 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CLEC4CQ8WTT0 213 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SGCDQ92629 289 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NT5C3BQ969T7 300 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 C18orf25Q96B23 403 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 PTCD3Q96EY7 689 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 STAMBPL1Q96FJ0 436 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 FER1L6-AS2Q96M78 137 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SPATA13Q96N96 652 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 OLFM3Q96PB7 478 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GCNAQ96QF7 691 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 ABHD1Q96SE0 405 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NPY6RQ99463 290 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 KLF6Q99612 283 aaPredicted RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 KCNJ15Q99712 375 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 HNRNPABQ99729 332 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 GDF15Q99988 308 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 TBC1D10AQ9BXI6 508 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 WNT5BQ9H1J7 359 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 CXCL16Q9H2A7 254 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 C12orf65Q9H3J6 166 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 DPEP3Q9H4B8 488 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NXF3Q9H4D5 531 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 DHX35Q9H5Z1 703 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 RNPEPL1Q9HAU8 725 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 KCNK13Q9HB14 408 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 FANCEQ9HB96 536 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SARS2Q9NP81 518 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 RPRD1BQ9NQG5 326 aaKnown RBP3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 NECTIN3Q9NQS3 549 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 FAM49BQ9NUQ9 324 aa3.78□□□□□ -1.8
ATPAF1-206ENST00000492233 SETD4Q9NVD3 440 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms